BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05268 (UTR included)
(1555 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042B1E12 1513 0.0
>BF01042B1E12
Length = 791
Score = 1513 bits (763), Expect = 0.0
Identities = 784/791 (99%)
Strand = Plus / Plus
Query: 470 aacaaacacacagcactaaacatcaacagacatgtctctggaacgccaagtccgcgctaa 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacaaacacacagcactaaacatcaacagacatgtctctggaacgccaagtccgcgctaa 60
Query: 530 gctcgcctccaagcgtaaccctgaacaagagaaggaggctcagggatggattgaaggcgt 589
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctcgcttccaagcgtaaccctgaacaagagaaggaggctcagggatggattgaaggcgt 120
Query: 590 ccttggcgctaaattccctcccggtgaactctttgaggatgtgctcaaggatggaaccgt 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccttggcgctaaattccctcccggtgaactctttgaggatgtgctcaaggatggaaccgt 180
Query: 650 tctatgccagctcatcaacaaactgaagccaggatcagtctccaaaatcaacacatccgg 709
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 181 tctatgccagctcatcaacaaactgaagccaggatcagtccccaaaatcaacacatccgg 240
Query: 710 cggacagttcaaaatgatggagaacattacaaacttccaatctgccatcaaagcgtatgg 769
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 cggacagttcaaaatgatggagaacatcacaaacttccaatctgccatcaaagcgtatgg 300
Query: 770 tgttccagacatcgacgtcttccagactgtggacctttgggagaagaaagacatcgcgca 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgttccagacatcgacgtcttccagactgtggacctttgggagaagaaagacatcgcgca 360
Query: 830 agtcgtcagcacactctttgccctcggccgtgagacctacagacaccctgaatggaacgg 889
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 agtcgtcagcacactctttgctctcggccgtgagacctacagacaccctgagtggaacgg 420
Query: 890 cccttacctaggacccaagccagctgaggaatgcaagcgcgatttctctgaagaagtcct 949
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cccctacctaggacccaagccagctgaggaatgcaagcgcgatttctctgaagaagtcct 480
Query: 950 gaaagccggtcagaccattgttggtctccaagccggatccaacaagggcgccactcaatc 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaagccggtcagaccattgttggtctccaagccggatccaacaagggcgccactcaatc 540
Query: 1010 cggtcagaacattggagccggtcgtaaaatcctccttggcaagtgaacacttcgcctcac 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cggtcagaacattggagccggtcgtaaaatcctccttggcaagtgaacacttcgcctcac 600
Query: 1070 aatctcacaaagtgatactaagttaaggttattgtacataactgtacttctgacgctctt 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatctcacaaagtgatactaagttaaggttattgtacataactgtacttctgacgctctt 660
Query: 1130 gtaagactgcatctagtgctctagtcatcacgtgtaagattgattgttctcttttctatg 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtaagactgcatctagtgctctagtcatcacgtgtaagattgattgttctcttttctatg 720
Query: 1190 aagatagcatgtaacttacctaatcggtaatatcttgtcatgtagcaccatttcggtttt 1249
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 721 aagatagcatgtaacttacctaatcggtaatatcttctcatgtagcaccatttcggtttt 780
Query: 1250 gtatttagcgt 1260
|||||||||||
Sbjct: 781 gtatttagcgt 791
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 255,253
Number of extensions: 7376
Number of successful extensions: 7376
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7376
Number of HSP's successfully gapped: 1
Length of query: 1555
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1538
Effective length of database: 8,119,229
Effective search space: 12487374202
Effective search space used: 12487374202
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)