BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05269 (UTR included)
(2551 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1854_C1 1199 0.0
>BF14_1854_C1
Length = 1066
Score = 1199 bits (605), Expect = 0.0
Identities = 608/609 (99%)
Strand = Plus / Plus
Query: 479 caggataagttaagcgagcacaatgcctttcaaacccgcagacaaccccaaatgtccgaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 caggataagttaagcgagcacaatgcctttcaaacccgcagacaaccccaaatgtccgaa 100
Query: 539 atgtggcaaatccgtgtacgccgcagaagagcgcgtcgctggagggctcaaatggcacaa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 atgtggcaaatccgtgtacgccgcagaagagcgcgtcgctggagggctcaaatggcacaa 160
Query: 599 gatgtgcttcaaatgtggtctgtgccaaaagttgctggactccactaactgctcagaaca 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gatgtgcttcaaatgtggtctgtgccaaaagttgctggactccactaactgctcagaaca 220
Query: 659 cgaaggtgaactttactgtaaagtatgccacgcccgcaaattcggacccaaaggttacgg 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 cgaaggtgaactttactgtaaagtatgccacgcccgcaaattcggacccaaaggttacgg 280
Query: 719 ctttggcggtggtgccggctgcctgtccatggacaccggtgaccatctgaaagctgagaa 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ctttggcggtggtgccggctgcctgtccatggacaccggtgaccatctgaaagctgagaa 340
Query: 779 cgcgggcgtacgaactaatggagcctgcttggagtcacgtgtaatagctaaggctccccc 838
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cgcgggcgtacgaaccaatggagcctgcttggagtcacgtgtaatagctaaggctccccc 400
Query: 839 gggcgaaggatgtccacgatgcggcggatgtgtatacgctgccgagcaaatgttggctcg 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gggcgaaggatgtccacgatgcggcggatgtgtatacgctgccgagcaaatgttggctcg 460
Query: 899 tggacgggcgtggcataaggagtgcttcaagtgcggtgactgccaaaagcgtttggactc 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tggacgggcgtggcataaggagtgcttcaagtgcggtgactgccaaaagcgtttggactc 520
Query: 959 caccaactgttgcgagggctcagacaaagatatttactgcaaagtgtgttatggaaagaa 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 caccaactgttgcgagggctcagacaaagatatttactgcaaagtgtgttatggaaagaa 580
Query: 1019 gtttgggcctaaaggatatggttatggcaagggagcaggtgtcctgcagagtgaccctta 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gtttgggcctaaaggatatggttatggcaagggagcaggtgtcctgcagagtgaccctta 640
Query: 1079 cgccaatgg 1087
|||||||||
Sbjct: 641 cgccaatgg 649
Score = 797 bits (402), Expect = 0.0
Identities = 414/418 (99%)
Strand = Plus / Plus
Query: 1156 gcgatcttgcaccgaggacaacggtgattgacacagccgctattaaggctcctcctggta 1215
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 649 gcgatcttgcaccgaggacaacggtgattgacacagccgctattaaagctcctcctggta 708
Query: 1216 aaggatgcccaagatgcggtggcgtcgtcttcgccgcggaacaggtcctagctaagggtc 1275
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 709 aaggatgcccaagatgcggtggcgtcgtcttcgccgcggaacaggtgctagctaagggtc 768
Query: 1276 gtgaatggcatcgcaagtgtttcaaatgccgcgattgccacaagaccttggattctatca 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gtgaatggcatcgcaagtgtttcaaatgccgcgattgccacaagaccttggattctatca 828
Query: 1336 tcgcttgtgatggtcccgattccgatgtttactgcaagacttgctacggaaagaaatggg 1395
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 829 tcgcttgtgatggtcccgattccgacgtttactgcaaaacttgctacggaaagaaatggg 888
Query: 1396 gacctcacggctacggtttcgcctgtggttctggattcctacaaaccgacggcttgaccg 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 gacctcacggctacggtttcgcctgtggttctggattcctacaaaccgacggcttgaccg 948
Query: 1456 aggaagaaatttctgcaaaccgcccatactacaatccagacactacgtcaatcaaggctc 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 aggaagaaatttctgcaaaccgcccatactacaatccagacactacgtcaatcaaggctc 1008
Query: 1516 ccaagggccagggttgcccaagatgtggtggtatggtatttgcagctgaacaacaact 1573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 ccaagggccagggttgcccaagatgtggtggtatggtatttgcagctgaacaacaact 1066
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 338,797
Number of extensions: 35713
Number of successful extensions: 35713
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 35711
Number of HSP's successfully gapped: 2
Length of query: 2551
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2534
Effective length of database: 8,119,229
Effective search space: 20574126286
Effective search space used: 20574126286
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)