BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05270 (UTR included)
(3370 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A1F12 1503 0.0
BF01019A2A10 658 0.0
>BF01033A1F12
Length = 802
Score = 1503 bits (758), Expect = 0.0
Identities = 792/802 (98%), Gaps = 1/802 (0%)
Strand = Plus / Plus
Query: 1270 cgcccaccaaaagaacgtcaagaaaacgatcacaaacaacggaaccaaagaaatcgccga 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcccaccaaaagaacgtcaagaaaacgatcacaaacaacggaaccaaagaaatcgccga 60
Query: 1330 atgaaatgtcaaatgcacgaacgagaagtgcacacgcaacagaaagcaagtattttgctc 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgaaatgtcaaatgcacgaacgagaagtgcacacgcaacagaaagcaagtattttgctc 120
Query: 1390 ctgaaaccgataaaagtcccgccaaaagatgtagaacaactagaaaaattgattctgatg 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgaaaccgataaaagtcccgccaaaagatgtagaacaactagaaaaattgattctgatg 180
Query: 1450 attcaaaaagagtaagtcatagagatctcgcgaaaaagaatgtccaagatctccaatctc 1509
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 attcaaaaagagtaagtcatagagatctcgcgaaaaagaatgtccaagatctgcaatctc 240
Query: 1510 caaagatctccaaacccaaaaatgatgtcacgaaagatctcgttcacattatcaagggaa 1569
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaagatctccaaaccaaaaaatgatgtcacgaaagatctcgttcacattatcaagggaa 300
Query: 1570 gggtaaaggaggccaaaacggatgcaaaaaaacgtattgtaaaaggaaaagaaaaacatg 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggtaaaggaggccaaaacggatgcaaaaaaacgtattgtaaaaggaaaagaaaaacatg 360
Query: 1630 aatctgattctgatagcgatcatctggccgttgaatctccagctccccgtaaatctgaga 1689
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatctgattctgacagcgatcatctggccgttgaatctccagctccccgtaaatctgaga 420
Query: 1690 gcgacgaagactttaaagtggaaaaagttacacctaaacaaaagaagccagttaagaaaa 1749
|||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 421 gcgacgaagattttaaagtggaaaaggttacacctaaacaaaagaagcccgttaagaaaa 480
Query: 1750 tagaccgatgtgttatatcagcagatgatgagatgcctttgaataaaattaatgtgtggt 1809
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tagaccgaagtgttatatcagcagatgatgagatgcctttgaataaaattaatgtgtggt 540
Query: 1810 gcgagatatatgttgaagaattagaagagtgggttcccgttgacgttgttagaggcatag 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcgagatatatgttgaagaattagaagagtgggttcccgttgacgttgttagaggcatag 600
Query: 1870 -ttcattctgccaatgaattatatagtcgttcgacacaccctgtatcatacattgttggt 1928
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttcattctgccaatgaattatatagtcgttcgacacaccctgtatcatacattgttggt 660
Query: 1929 tgggacaacaataattacttaaaagatctgacaagacgctacgtgccatattggaacaca 1988
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgggacaacaataattacttaaaagatctgacaagacgctacgtgccatattggaacacg 720
Query: 1989 gttacacgtaaactgagagttgatcctggatggtgggaagaagcgataaagccgtggttg 2048
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 721 gttacacgtaaactgagagttgatcctggatggtgggaagaagcgataaagccatggttg 780
Query: 2049 ggaccaaaaaccgccagggaca 2070
||||||||||||||||||||||
Sbjct: 781 ggaccaaaaaccgccagggaca 802
>BF01019A2A10
Length = 562
Score = 658 bits (332), Expect = 0.0
Identities = 341/344 (99%)
Strand = Plus / Plus
Query: 892 aaccaacgacaaggaccaaaagaaacttgagattgcaatcaaaaaatacaaaaacaacaa 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aaccaacgacaaggaccaaaagaaacttgagattgcaatcaaaaaatacaaaaacaacaa 278
Query: 952 tacatgaaactaaacagtcagaaagtctttctaataaaaaagatgatataaaagccacta 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tacatgaaactaaacagtcagaaagtctttctaataaaaaagatgatataaaagccacta 338
Query: 1012 aaagtaaacgaaaaatattaagtttaaatctatcagttaccaaaaacgaccaagataaca 1071
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aaagtaaacgaaaaatattaagtttaaatctatcagttaccaaaaacgaccaagataacg 398
Query: 1072 aaaccaaaagtacatcaaaaacgatagttaataaatgctctgcaaacagaattactagag 1131
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 399 aaaccaaaagtacatcaaaaactatagttaataaatgctctgcaaacagaattactagag 458
Query: 1132 caaacattacttcactcaacgaatcaaacgcaatacttactaagactttatcaaaacaat 1191
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 caaacattacttcactaaacgaatcaaacgcaatacttactaagactttatcaaaacaat 518
Query: 1192 cgtccttagataaagttcctaagatcatccttacagacataaac 1235
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cgtccttagataaagttcctaagatcatccttacagacataaac 562
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 439,125
Number of extensions: 21779
Number of successful extensions: 21779
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 21778
Number of HSP's successfully gapped: 2
Length of query: 3370
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3352
Effective length of database: 8,109,745
Effective search space: 27183865240
Effective search space used: 27183865240
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)