BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05283 (UTR included)
(1807 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 131 4e-30
BF01043B1E03 92 4e-18
BF01017A1F03 76 2e-13
BF01019A1H08 76 2e-13
>BF14_335_C2
Length = 1827
Score = 131 bits (66), Expect = 4e-30
Identities = 108/122 (88%)
Strand = Plus / Minus
Query: 535 gtataacagttaaaactctctactgcctactaaaagatttgggcctgtccagacctaaca 594
||||||||| |||| |||||||| ||||||||||| | ||||||||||||||| ||||||
Sbjct: 1102 gtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaactaaca 1043
Query: 595 tcaattcattcttagaacgcacttcaaaggcagccctagtaggtttgtttcaaatttggt 654
|| ||||||||| ||||| ||||| ||| |||| |||||||||| ||||||||||||||
Sbjct: 1042 ccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaatttggt 983
Query: 655 ta 656
||
Sbjct: 982 ta 981
>BF01043B1E03
Length = 830
Score = 91.7 bits (46), Expect = 4e-18
Identities = 102/120 (85%), Gaps = 3/120 (2%)
Strand = Plus / Plus
Query: 550 ctctctactgcctactaaaagatttgggcctgtccagacctaacatcaattcattcttag 609
|||||||| |||||| ||| | ||| ||||| ||||| |||||||||| |||||||| |
Sbjct: 231 ctctctacaacctactgaaacacttgagcctgcccagaactaacatcaaatcattcttgg 290
Query: 610 aacgcacttcaaaggcagccctagtaggtttgtttcaaatttggttaaatagagagagga 669
|||| ||| ||||||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct: 291 aacgtactgcaaaggcaggcctag---gtttgtttcaaatttggttaggtagagagagga 347
>BF01017A1F03
Length = 782
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 589 ctaacatcaattcattcttagaacgcacttcaaag--gcagccctagtaggtttgtttca 646
||||||||||||||||||| ||||| ||||| ||| |||||||||||| || |||||
Sbjct: 136 ctaacatcaattcattcttggaacgtacttccaaggcgcagccctagtacattagtttct 195
Query: 647 aatttggttaaatagagagaggagc 671
|| ||||||| ||||||||||||||
Sbjct: 196 aagttggttagatagagagaggagc 220
>BF01019A1H08
Length = 504
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 708 cttaaacctgcacctggatcccaagtcccaggcactgttaaaattcctctacctgcaacg 767
||||||||| ||||||| || ||| |||||||||||||| || |||||| |||||||||
Sbjct: 478 cttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacg 419
Query: 768 cgatctacccggcacacgcacg 789
|||| ||||||||| ||||||
Sbjct: 418 cgatggacccggcacccgcacg 397
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 174,415
Number of extensions: 3093
Number of successful extensions: 3093
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 3092
Number of HSP's successfully gapped: 4
Length of query: 1807
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1790
Effective length of database: 8,119,229
Effective search space: 14533419910
Effective search space used: 14533419910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)