BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05285 (UTR included)
(2935 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045B1D08 1433 0.0
>BF01045B1D08
Length = 775
Score = 1433 bits (723), Expect = 0.0
Identities = 762/775 (98%)
Strand = Plus / Plus
Query: 1272 gtgttatcttttttgtgcatattgagaataacaaggaatcaacagtcagcccttctggat 1331
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgttatcatttttgtgcatattgagaataacaaggaatcaacagtcagcccttctggat 60
Query: 1332 ctcgttctgaaggccatgtatatgacatatgtgaaaaactgcaaattcgttagccctacc 1391
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 ctcgttctgaaggccatgtatatgacatatgtcaaaaactgcaaattcgttagccctacc 120
Query: 1392 acctggccagggataaactttatgagacgatccctcgtggagatgttctccttagacctt 1451
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 acctggccagggataaactttatgagacgatccctcgttgagatgttctccttagacctt 180
Query: 1452 aatgtttcctaccaacacgtatttctctacatccgacagctcgcaatacatttacgaaac 1511
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 181 aatgtatcctaccaacacgtatttctctacatccgacaactcgcaatacatttacgaaac 240
Query: 1512 gcgattgttgttcagaaaattgaaaacagacaagccgtatacaattggcagtttgttaat 1571
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 241 gcaattgttgttcagaaaattgaaaacagacaagccgtatacaattggcagtttgtgaat 300
Query: 1572 tccctccatctgtgggccgatttaatatcggccacttcaaataagccacaactgcagcca 1631
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccctccatctgtgggccgatctaatatcggccacttcaaataagccacaactgcagcca 360
Query: 1632 ctgctttaccctttggttatggtgataacgaataccataaaactggtgccaacacaccaa 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgctttaccctttggttatggtgataacgaataccataaaactggtgccaacacaccaa 420
Query: 1692 tattatccactaagattccattgtgttgaaatattaattagtctatcaaaggaaaccgat 1751
||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 421 tattatccattaagattccattgcgttgagatattaattagtctatcaaaggaaaccgat 480
Query: 1752 acctttataccaattcttccattcattgttgagattttaacagcttatgattttaataag 1811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acctttataccaattcttccattcattgttgagattttaacagcttatgattttaataag 540
Query: 1812 aaaaataaaaaaatgtcaatgaagccattagatttctcttgtatattaagattggcaaaa 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 541 aaaaataaaaaaatgtcaatgaagccattagatttctcttgtatattaagattagcaaaa 600
Query: 1872 tctcagcttatggagaacggtttcaaagactcagtcatcgatagactgtatgcactgtta 1931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tctcagcttatggagaacggtttcaaagactcagtcatcgatagactgtatgcactgtta 660
Query: 1932 ctggaatacacggccagtatatcaaatagcattgcttttccagatatcagtctactcgca 1991
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctggaatacacggccagtatttcaaatagcattgcttttccagatatcagtctactcgca 720
Query: 1992 ataatacagatgaagcagtttttgaaaacatgcaccgttgcgaattatacgaaaa 2046
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ataatacagatgaagcagtttttgaaaacatgcaccgttgcgaattatacgaaaa 775
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 394,954
Number of extensions: 8799
Number of successful extensions: 8799
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8799
Number of HSP's successfully gapped: 1
Length of query: 2935
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2917
Effective length of database: 8,109,745
Effective search space: 23656126165
Effective search space used: 23656126165
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)