BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05306 (UTR included)
(1409 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01035X1B05 1007 0.0
>BF01035X1B05
Length = 770
Score = 1007 bits (508), Expect = 0.0
Identities = 535/544 (98%)
Strand = Plus / Plus
Query: 290 atttcggtgctgggccagccaagttgccagaggaagtgtatgaaatattaaaacaagaat 349
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttcggggctgggccagccaagttgccagaggaagtgtatgaaatattaaaacaagaat 60
Query: 350 tgaccaactttgaagggacagggatcagtttattggagacgagtcatcgtacgcctgctt 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaccaactttgaagggacagggatcagtttattggagacgagtcatcgtacgcctgctt 120
Query: 410 acgctaaattaaataaggatgtacaagatgttgtgagaaagttgttaaatgtcccgaaca 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgctaaattaaataaggatgtacaagatgttgtgagaaagttgttaaatgtcccgaaca 180
Query: 470 actacaaaatactatttctatctggcggcggtcagggacaatttgctgcggtgccactaa 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actacaaaatactatttctatctggcggcggtcagggacaatttgctgcggtgccactaa 240
Query: 530 atttaatatcacgtactggttcagccgactatgtagtgactggtgcctggtcagcaaaag 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atttaatatcacgtactggttcagccgactatgtagtgactggtgcctggtcagcaaaag 300
Query: 590 ccgcaaaggaagcgaagaagtacggtaaggtgaatctggtattaccacctactgaccgtt 649
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct: 301 ccgcaaaggaagcgaagaagtacggtaaggtgaatctggtgttaccaccaactgaccgct 360
Query: 650 acgtggaaatcccagatcagtcaacttggaaactcgaccccaacgcttcctacgtccata 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acgtggaaatcccagatcagtcaacttggaaactcgaccccaacgcttcctacgtccata 420
Query: 710 tttgcaccaatgagacgattcacggaatagaatttgattttatcccggacactaaagttg 769
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 421 tttgcacaaatgagacgattcacggaatagaatttgattttatcccggacactaaaggtg 480
Query: 770 tcccactggttgctgatatgtcttccaattttatgtccaagaaaattgatgtttctaaag 829
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgcctctggttgctgatatgtcttccaattttatgtccaagaaaattgatgtttctaaat 540
Query: 830 ttgg 833
||||
Sbjct: 541 ttgg 544
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 179,094
Number of extensions: 3857
Number of successful extensions: 3857
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3857
Number of HSP's successfully gapped: 1
Length of query: 1409
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1392
Effective length of database: 8,119,229
Effective search space: 11301966768
Effective search space used: 11301966768
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)