BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05307 (UTR included)
(1171 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 143 7e-34
BF14_335_C4 133 7e-31
BF01043B1E03 131 3e-30
BF01047B2H03 113 6e-25
BF01037A2H12 105 2e-22
BF01017A1F03 96 2e-19
BF01016B1E06 94 6e-19
BF01060B1D11 86 1e-16
BF14_335_C5 82 2e-15
BF01021A2B11 74 6e-13
BF01044B2F11 72 2e-12
>BF14_335_C2
Length = 1827
Score = 143 bits (72), Expect = 7e-34
Identities = 137/158 (86%), Gaps = 3/158 (1%)
Strand = Plus / Minus
Query: 746 tataacagccaaatctctctacaacctgctaaaagtcttagacctgccaagaactaacat 805
||||||||| ||||||||||||| ||| |||||| ||| | |||| | ||||||||||
Sbjct: 1101 tataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaactaacac 1042
Query: 806 cagttcattcttggaacgtgcgtcgaaggcagccctagcaggttcgtttcaaatttggtt 865
|||||||||||| |||||| | |||||| |||| |||| |||||||||||||||||||||
Sbjct: 1041 cagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaatttggtt 982
Query: 866 aggtagagagagaagcttggacagtggaggtgagcgtt 903
|| ||||||| ||||||||| |||||||||||||||
Sbjct: 981 ag---gagagaggagcttggacggtggaggtgagcgtt 947
Score = 113 bits (57), Expect = 6e-25
Identities = 96/109 (88%)
Strand = Plus / Minus
Query: 576 tattcgcgaattttaaagcgcattgtactaatagagctcacggtaccttgggaaaccaac 635
||||||||||||||||||||| | |||||||||| ||||| |||||| | ||||||
Sbjct: 1266 tattcgcgaattttaaagcgcgctacgctaatagagcctacggttccttggaagaccaac 1207
Query: 636 atccccaaagaccatgccatcaaggtcagcaagtaatatgagctcacta 684
||||||||| |||||||||||||||||| |||||| |||||||||||||
Sbjct: 1206 atccccaaaaaccatgccatcaaggtcaacaagtattatgagctcacta 1158
>BF14_335_C4
Length = 1491
Score = 133 bits (67), Expect = 7e-31
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 811 cattcttggaacgtgcgtcgaaggcagccctagcaggttcgtttcaaatttggttaggta 870
||||||||||||||| ||| ||||||||||||||||| ||| |||| |||||||||||||
Sbjct: 1135 cattcttggaacgtgagtctaaggcagccctagcaggatcgattcatatttggttaggta 1194
Query: 871 gagagagaagcttggacagtggaggtgagcgtttaacgcgcgt 913
||||||| |||||||| ||| ||||||||||||||| ||||||
Sbjct: 1195 gagagaggagcttggaaagttgaggtgagcgtttaatgcgcgt 1237
>BF01043B1E03
Length = 830
Score = 131 bits (66), Expect = 3e-30
Identities = 137/160 (85%), Gaps = 3/160 (1%)
Strand = Plus / Plus
Query: 758 atctctctacaacctgctaaaagtcttagacctgccaagaactaacatcagttcattctt 817
||||||||||||||| || ||| ||| |||||| ||||||||||||| ||||||||
Sbjct: 229 atctctctacaacctactgaaacacttgagcctgcccagaactaacatcaaatcattctt 288
Query: 818 ggaacgtgcgtcgaaggcagccctagcaggttcgtttcaaatttggttaggtagagagag 877
||||||| | | ||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct: 289 ggaacgtactgcaaaggcaggcctag---gtttgtttcaaatttggttaggtagagagag 345
Query: 878 aagcttggacagtggaggtgagcgtttaacgcgcgttaga 917
| |||||||||||||||||||| |||||||||||||||
Sbjct: 346 gaccttggacagtggaggtgagcacttaacgcgcgttaga 385
>BF01047B2H03
Length = 758
Score = 113 bits (57), Expect = 6e-25
Identities = 292/366 (79%), Gaps = 7/366 (1%)
Strand = Plus / Minus
Query: 234 aacttgctacatctgcggggaggcagttggaactactaagcatttgctggtgggatgtag 293
||||||||| ||||||| |||||||||||||| | || ||||||||||| ||||||||||
Sbjct: 365 aacttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtag 306
Query: 294 ggtacacctagataccggtcaatact-cgcgtcgtcacgatagggtttaagaaatcatac 352
| ||| ||| |||| ||||||||||| | ||| || |||||||||| | | ||||||
Sbjct: 305 gctactcctggatagcggtcaatactaccggtctccatgatagggttttaaatttcatac 246
Query: 353 gtgaagcggttagtctatcagtagcaagagcgcaaaaataaataacctcgaacccacgat 412
||||||||||||| | | |||| | ||| ||||| |||||||| | ||| ||||
Sbjct: 245 atgaagcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacgggcgat 186
Query: 413 caataggttttgtgagagaaggcactagggctacaa----aatcgtaaagccctactcga 468
||| |||||||||||||||| || |||||||| || || | | ||||| ||||| |
Sbjct: 185 taattggttttgtgagagaagacattagggctataaagtcaaacatcaagccttactcta 126
Query: 469 ttattaaagcggcttcagattgcactttaatgatggacacgtatgagaaacaacataagt 528
| ||||||||| ||| ||||||||| |||| ||||| ||||||| | ||| | | ||
Sbjct: 125 tccttaaagcggtttcggattgcactataatcatggatacgtatggggaacgatacaaaa 66
Query: 529 tcccagaggatatttgtgcgtcggcgtctagaccggacatagttt-tatattcgcgaatt 587
|||| ||| ||| ||||| ||||| || ||||| |||||| ||| ||||||||||||||
Sbjct: 65 tccccgagcata-ttgtgtgtcggtttccagaccagacatattttatatattcgcgaatt 7
Query: 588 ttaaag 593
||||||
Sbjct: 6 ttaaag 1
>BF01037A2H12
Length = 773
Score = 105 bits (53), Expect = 2e-22
Identities = 96/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 709 ttgtaaatttgtactcggtagaagtaggagcgagatatataacagccaaatctctctaca 768
|||| ||||||||| |||| |||||||||||||| ||||| ||||||||||||| |||
Sbjct: 666 ttgtgaatttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgaca 725
Query: 769 acctgctaaaagtcttagacctgccaagaactaacatcagttcattctt 817
|||||||||||| ||| | | |||||||| |||||||||||||||||||
Sbjct: 726 acctgctaaaagactt-gccttgccaagagctaacatcagttcattctt 773
>BF01017A1F03
Length = 782
Score = 95.6 bits (48), Expect = 2e-19
Identities = 105/123 (85%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 797 aactaacatcagttcattcttggaacgtgcgtcgaaggc--agccctagcaggttcgttt 854
||||||||||| |||||||||||||||| | || ||||| |||||||| | || ||||
Sbjct: 134 aactaacatcaattcattcttggaacgtacttccaaggcgcagccctagtacattagttt 193
Query: 855 caaatttggttaggtagagagagaagcttggacagtggaggtgagcgtttaacgcgcgtt 914
| || |||||||| ||||||||| ||||| || ||||||||||||||||||||||| ||
Sbjct: 194 ctaagttggttagatagagagaggagcttccacggtggaggtgagcgtttaacgcgcatt 253
Query: 915 aga 917
|||
Sbjct: 254 aga 256
>BF01016B1E06
Length = 606
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 852 tttcaaatttggttaggtagagagagaagcttggacagtggaggtgagcgtttaacgcg 910
|||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 323 tttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaacgcg 265
>BF01060B1D11
Length = 799
Score = 85.7 bits (43), Expect = 1e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 220 aaaggtaccgaaaaaacttgctacatctgcggggaggcagttggaactactaagcatttg 279
|||| |||||||||||||||||| || |||| | |||||||||||| | |||||||||||
Sbjct: 198 aaagataccgaaaaaacttgctatatttgcgagaaggcagttggaattgctaagcatttg 139
Query: 280 ctggtgggatgtagg 294
||| |||||||||||
Sbjct: 138 ctgatgggatgtagg 124
>BF14_335_C5
Length = 1597
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 866 aggtagagagagaagcttggacagtggaggtgagcgtttaacgcgcgttagac 918
|||||||||||| ||||||||| |||||||||||||||||| |||||||||||
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagac 1490
>BF01021A2B11
Length = 729
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/64 (90%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 854 tcaaatttggttaggtagagagagaagcttggacagtggaggtgagcgtttaacgcgcgt 913
||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||
Sbjct: 357 tcaaatttggttaggaagagagg--agcttggacggtggaggtgagcgtttaacgcgtgt 414
Query: 914 taga 917
||||
Sbjct: 415 taga 418
>BF01044B2F11
Length = 728
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 862 ggttaggtagagagagaagcttggacagtggaggtgagcgttta 905
|||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 586 ggttagatagagagaggagcttggacagtggaggtgagcgttta 629
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 128,450
Number of extensions: 2601
Number of successful extensions: 2601
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 2594
Number of HSP's successfully gapped: 12
Length of query: 1171
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1154
Effective length of database: 8,119,229
Effective search space: 9369590266
Effective search space used: 9369590266
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)