BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05323 (UTR included)
(1474 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B1E03 111 3e-24
BF14_335_C2 107 5e-23
BF01055B2A04 76 2e-13
>BF01043B1E03
Length = 830
Score = 111 bits (56), Expect = 3e-24
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 715 gaggtataacagctaaatctctctacaacctactgaaagacttgagcctgtccagaacta 774
|||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 213 gaggtataacagcttcatctctctacaacctactgaaacacttgagcctgcccagaacta 272
Query: 775 acatcaattcattctt 790
||||||| ||||||||
Sbjct: 273 acatcaaatcattctt 288
>BF14_335_C2
Length = 1827
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 713 gagaggtataacagctaaatctctctacaacctactgaaagacttgagcctgtccagaac 772
||||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 773 taacatcaattcattctt 790
||||| || |||||||||
Sbjct: 1047 taacaccagttcattctt 1030
>BF01055B2A04
Length = 830
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 643 ttaatagagcttacgattccttagaaaaccaacatccccaaagacc 688
|||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 544 ttaatagagcttacgattccctggaaaaccaacatccccaaagacc 499
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 197,636
Number of extensions: 4132
Number of successful extensions: 4132
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4132
Number of HSP's successfully gapped: 3
Length of query: 1474
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1457
Effective length of database: 8,119,229
Effective search space: 11829716653
Effective search space used: 11829716653
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)