BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05345 (UTR included)
(1951 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1485_C1 1132 0.0
>BF14_1485_C1
Length = 786
Score = 1132 bits (571), Expect = 0.0
Identities = 588/596 (98%)
Strand = Plus / Plus
Query: 552 gatactacacctcaaaagaaacacaaacgacataaacataagaaacataaaaaacgcaaa 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gatactacacctcaaaagaaacacaaacgacataaacataagaaacataaaaaacgcaaa 250
Query: 612 atcgacaacgactacgacagcgatagttccatcgacgtagcttacgaagatgctgtagac 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atcgacaacgactacgacagcgatagttccatcgacgtagcttacgaagatgctgtagac 310
Query: 672 aaaacatttaaaatgaaaccaaaaaaggagatccctgggacatccgccgccgacatttta 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaaacatttaaaatgaaaccaaaaaaggagatccctgggacatccgccgccgacatttta 370
Query: 732 aaggctcaaacagttaagtcatcttcagattcaagaaaatctatacctggatcttcttct 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aaggctcaaacagttaagtcatcttcagattcaagaaaatctatacctggatcttcttct 430
Query: 792 agtactccccccaagactgcaccaaaaaagaaaaaagcaaaaggcaaggacagtggaact 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agtactccccccaagactgcaccaaaaaagaaaaaagcaaaaggcaaggacagtggaact 490
Query: 852 tctagtgaagaagagcgatggcttgatgctataaaatcaggaaaactggaagaagttgat 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tctagtgaagaagagcgatggcttgatgctataaaatcaggaaaactggaagaagttgat 550
Query: 912 gaggaattaaaaaaaatcaaaccaaaagatcccaaaatgatgacagcaagacaaagagca 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gaggaattaaaaaaaatcaaaccaaaagatcccaaaatgatgacagcaagacaaagagca 610
Query: 972 atgtatgagcgaggcacagataaagatactggtcttggaggagaggtgttactggctctg 1031
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 611 atgtatgagcgaggcacagataaagatactggtcttggaggagaggtattactggctctg 670
Query: 1032 ccatctggttacaaagaaaaagtcatgacggctgaagctatacaaaaagctgcattaaaa 1091
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 671 ccatctggttacaaagaaaaagtcatgacggctnnnnctatacaaaaagctgcattaaaa 730
Query: 1092 tctcaaaaaagaaaacaaatggctgatgaaaagagagaaaaagacaaaaagaaaac 1147
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tctcaannnagaaaacaaatggctgatgaaaagagagaaaaagacaaaaagaaaac 786
Score = 218 bits (110), Expect = 3e-56
Identities = 113/114 (99%)
Strand = Plus / Plus
Query: 439 tactgtcaaagtaaacatagttttcctaattgtttaattatttcacgtcttaataaaaaa 498
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tactgtcaaagtaaacataattttcctaattgtttaattatttcacgtcttaataaaaaa 60
Query: 499 taatggtacgaagacagcgggaccaaagtacttcagaagatgaaatagttattg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taatggtacgaagacagcgggaccaaagtacttcagaagatgaaatagttattg 114
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 291,344
Number of extensions: 6399
Number of successful extensions: 6399
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6398
Number of HSP's successfully gapped: 2
Length of query: 1951
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1934
Effective length of database: 8,119,229
Effective search space: 15702588886
Effective search space used: 15702588886
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)