BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05346 (UTR included)
(2956 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3238_C1 1394 0.0
>BF14_3238_C1
Length = 979
Score = 1394 bits (703), Expect = 0.0
Identities = 709/711 (99%)
Strand = Plus / Plus
Query: 2246 acctagtacaatgggtgatggtactggctgtgacaacatgaccgctattatagtgaggtt 2305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 acctagtacaatgggtgatggtactggctgtgacaacatgaccgctattatagtgaggtt 61
Query: 2306 caaagatggagttatcggtgatgttggacagtacacaactgaatcaaagaaacgcacagc 2365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caaagatggagttatcggtgatgttggacagtacacaactgaatcaaagaaacgcacagc 121
Query: 2366 agaagatgaacccaatgatgaccagcaagactcgaaaaggccacgaattgatgattcttt 2425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agaagatgaacccaatgatgaccagcaagactcgaaaaggccacgaattgatgattcttt 181
Query: 2426 atcaagttcgattgtgacttcgagtgtttaatcactattataagtatacagtgttaaaat 2485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atcaagttcgattgtgacttcgagtgtttaatcactattataagtatacagtgttaaaat 241
Query: 2486 gatgcagactactgtaaattatagacattgaaattaatcccagaactattactatttgtt 2545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gatgcagactactgtaaattatagacattgaaattaatcccagaactattactatttgtt 301
Query: 2546 tatgtttcatttgatttctatttatactttacatatctacagcgtacacacctcgctact 2605
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 302 tatgtttcatttgatttctatttatactttacatacctacagcgtacacacctcgctact 361
Query: 2606 catgtttggtatttatcaaaaagtgtttgtttattatagagtgctaatagttcactagga 2665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 catgtttggtatttatcaaaaagtgtttgtttattatagagtgctaatagttcactagga 421
Query: 2666 ttcttactatgtggccttggtgtgccattgcttatttattgaatattggtgaaataatgc 2725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttcttactatgtggccttggtgtgccattgcttatttattgaatattggtgaaataatgc 481
Query: 2726 caaatgtttaattttctatactgaaattaatttgtcttgaaatatttagagtcattccat 2785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caaatgtttaattttctatactgaaattaatttgtcttgaaatatttagagtcattccat 541
Query: 2786 aaaataaaaattttggtttcttacaatacataaaaatgtttggattttttataaaaaatg 2845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aaaataaaaattttggtttcttacaatacataaaaatgtttggattttttataaaaaatg 601
Query: 2846 tgcaacatattttttataaagactaattatagtgttgttaaggataaattcataaattaa 2905
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgcaacatatattttataaagactaattatagtgttgttaaggataaattcataaattaa 661
Query: 2906 ttttgataccaatcaataagactaagctaaattcaaaaatgcatagatgta 2956
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ttttgataccaatcaataagactaagctaaattcaaaaatgcatagatgta 712
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 375,711
Number of extensions: 7985
Number of successful extensions: 7985
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7984
Number of HSP's successfully gapped: 1
Length of query: 2956
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2938
Effective length of database: 8,109,745
Effective search space: 23826430810
Effective search space used: 23826430810
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)