BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05364 (UTR included)
(1357 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2249_C1 218 2e-56
BF01062A1H02 88 4e-17
>BF14_2249_C1
Length = 1315
Score = 218 bits (110), Expect = 2e-56
Identities = 239/277 (86%), Gaps = 10/277 (3%)
Strand = Plus / Plus
Query: 1087 gcagtggcgtgcacagagagtttgggggtagggtgagcagaatatgttttggaaaaaaaa 1146
||||||||||||||||||| || ||||||||||||||| ||||||||| |||||||| |
Sbjct: 226 gcagtggcgtgcacagagattt--ggggtagggtgagcaaaatatgttt-ggaaaaaata 282
Query: 1147 ttaccaattttcatcatttcctcttctaaaacattgataataatgaggtctgtagcaaga 1206
| || |||||| |||||||||||||||||||||||||||||||| |||||| | ||||
Sbjct: 283 t-actaatttttatcatttcctcttctaaaacattgataataataaggtctttcacaagt 341
Query: 1207 actcatttaaatgaaactaatgttttcgga---ctacgcgtaatttataatcatcatgca 1263
| ||||||||||||||||||| |||||||| |||||||||||||||||| | |||||
Sbjct: 342 attcatttaaatgaaactaatattttcggattgctacgcgtaatttataattgttatgca 401
Query: 1264 ggcgagatgtccgcagcgatcccg---gctgctgagtgagcggagtgtcgggagcatgga 1320
| ||||||||| |||| |||| || |||||||||| | |||| ||||||||| ||| |
Sbjct: 402 gacgagatgtctgcagtgatcacggttgctgctgagtaatcggaatgtcgggagaatgta 461
Query: 1321 acccgacaatattagtttcattaaaaaattgataata 1357
| |||| ||||||||||||||| ||| ||||||||||
Sbjct: 462 atccgaaaatattagtttcatttaaacattgataata 498
>BF01062A1H02
Length = 876
Score = 87.7 bits (44), Expect = 4e-17
Identities = 122/144 (84%), Gaps = 8/144 (5%)
Strand = Plus / Plus
Query: 1092 ggcgtgcacagagagtttgggggtagggtgagcagaatatgttttggaaaaaaaattacc 1151
|||||||||||||| || ||| |||||| |||||||||||||| |||||||||| |||
Sbjct: 93 ggcgtgcacagaga--ttcgggttagggtaagcagaatatgttt--gaaaaaaaat-acc 147
Query: 1152 aattttcatcat---ttcctcttctaaaacattgataataatgaggtctgtagcaagaac 1208
||||||||| || |||||| |||||| ||||||||||||||| ||| | ||||| |
Sbjct: 148 aattttcataataatttcctcctctaaaccattgataataatgaaatctttcgcaagtat 207
Query: 1209 tcatttaaatgaaactaatgtttt 1232
|||||||||| |||||||| ||||
Sbjct: 208 tcatttaaataaaactaatatttt 231
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 133,855
Number of extensions: 2564
Number of successful extensions: 2564
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2556
Number of HSP's successfully gapped: 2
Length of query: 1357
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1340
Effective length of database: 8,119,229
Effective search space: 10879766860
Effective search space used: 10879766860
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)