BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05368 (UTR included)
(2338 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B2E06 123 1e-27
BF14_335_C2 100 2e-20
>BF01031B2E06
Length = 707
Score = 123 bits (62), Expect = 1e-27
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 616 tcactaagaataggttcgttgtaaatttgtacgcggtagaagtgggagcgagagttataa 675
||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| |||
Sbjct: 489 tcactaagaataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgtaa 548
Query: 676 cagccaaatccccctacagcctactaaaagacttgggcctgtccagaactaaca 729
||| ||||| | | ||| |||||||||| |||||||||||||||| ||||||
Sbjct: 549 aagctaaatctctccacaacctactaaaaaccttgggcctgtccagatctaaca 602
>BF14_335_C2
Length = 1827
Score = 99.6 bits (50), Expect = 2e-20
Identities = 104/121 (85%), Gaps = 7/121 (5%)
Strand = Plus / Minus
Query: 616 tcactaagaataggttcgttgtaaa-tttgtacgcggtagaagtgggagc------gaga 668
|||||| |||||||||||| |||| |||||||| |||||||||||||| ||||
Sbjct: 1163 tcactaggaataggttcgtaataaaatttgtacgtggtagaagtgggagaaagtgagaga 1104
Query: 669 gttataacagccaaatccccctacagcctactaaaagacttgggcctgtccagaactaac 728
| ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||
Sbjct: 1103 ggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaactaac 1044
Query: 729 a 729
|
Sbjct: 1043 a 1043
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 278,418
Number of extensions: 6165
Number of successful extensions: 6165
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6165
Number of HSP's successfully gapped: 2
Length of query: 2338
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2321
Effective length of database: 8,119,229
Effective search space: 18844730509
Effective search space used: 18844730509
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)