BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05373 (UTR included)
(1486 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2613_C1 963 0.0
>BF14_2613_C1
Length = 826
Score = 963 bits (486), Expect = 0.0
Identities = 530/547 (96%), Gaps = 12/547 (2%)
Strand = Plus / Plus
Query: 383 gggaaacaatatgaaaattgatattattttatcttattagacttaaagaaaaaatcttta 442
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggaaacaatatcaaaattgatattattttatcttattagacttaaagaaaaaatcttta 60
Query: 443 tcgtttagttagcgagaataattatttactttctaataataaaaaaaatattggaggcat 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtttagttagcgagaataattatttactttctaataataaaaaaaatattggaggcat 120
Query: 503 gatggtggaaggttcagcatttacgcggaacgatgtgttccaaatggctattcgtgttgc 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatggtggaaggttcagcatttacgcggaacgatgtgttccaaatggctattcgtgttgc 180
Query: 563 ttttgtatctgcggttacttatttctctataaaatggctcgtcaatcaaatagatccgac 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttgtatctgcggttacttatttctctataaaatggctcgtcaatcaaatagatccgac 240
Query: 623 ttctaagagtcgaaagaaagctgaagaaagagcgcgggaacagttacgcaa--------- 673
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttctaagagtcgaaagaaagctgaagaaagagcgcgggaacagttacgcaaaatatcttg 300
Query: 674 ---agccggattggtcgggaagcaggccttggctctggacaagctcaccgatcatgaaat 730
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagagccggattggtcgggaagcaggccttggctctggacaagctcaccgatcatgaaat 360
Query: 731 gatcatcgcctcacaacttgtggtacctgaagagattaatgttaattggaaggatatagc 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatcatcgcctcacaacttgtggtacctgaagagattaatgttaattggaaggatatagc 420
Query: 791 gggtctagatcatctcatcaatgaactccgtgagactgttattctgccgatacagaaacg 850
|||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct: 421 gggtctagatcatctcatcaatgaactccgcgagactgttattctaccaatacagaaacg 480
Query: 851 ggagctgtttgctgacagtcgactcacacagccacctaaaggtgtactgttgcatgggcc 910
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggagctgtttgccgacagtcgactcacacagccacctaaaggtgtactgttgcatgggcc 540
Query: 911 acccggt 917
|||||||
Sbjct: 541 acccggt 547
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 263,494
Number of extensions: 8146
Number of successful extensions: 8146
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8146
Number of HSP's successfully gapped: 2
Length of query: 1486
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1469
Effective length of database: 8,119,229
Effective search space: 11927147401
Effective search space used: 11927147401
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)