BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05401 (UTR included)
(1828 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 92 4e-18
BF01049B1F01 82 4e-15
BF14_335_C4 72 3e-12
BF14_335_C2 70 1e-11
>BF01019A1H08
Length = 504
Score = 91.7 bits (46), Expect = 4e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 553 taaacctacagacgggtcgcaagtcccaggcactgttaaagctcctctccctgcaacggg 612
|||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| |
Sbjct: 476 taaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgcg 417
Query: 613 atggacccgacacc 626
||||||||| ||||
Sbjct: 416 atggacccggcacc 403
>BF01049B1F01
Length = 840
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 566 gggtcgcaagtcccaggcactgttaaagctcctctccctgcaacg 610
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 631 gggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 587
>BF14_335_C4
Length = 1491
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 553 taaacctacagacgggtcgcaagtcccaggcactgttaaagctcctctccctgcaacggg 612
|||||||||| |||||||||||||||||||||||| |||||||||| ||||||||| |
Sbjct: 1253 taaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaacgcg 1311
Query: 613 atgg 616
||||
Sbjct: 1312 atgg 1315
>BF14_335_C2
Length = 1827
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 568 gtcgcaagtcccaggcactgttaaagctcctctccctgcaacg 610
||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 905 gtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 237,786
Number of extensions: 5054
Number of successful extensions: 5054
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5054
Number of HSP's successfully gapped: 4
Length of query: 1828
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1811
Effective length of database: 8,119,229
Effective search space: 14703923719
Effective search space used: 14703923719
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)