BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05411 (UTR included)
(1654 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B2B04 597 e-170
>BF01022B2B04
Length = 337
Score = 597 bits (301), Expect = e-170
Identities = 304/305 (99%)
Strand = Plus / Minus
Query: 1350 ttttttattaatactcaggttttgaatagaagaagctagattttatttcaattgtatatt 1409
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tttttttttaatactcaggttttgaatagaagaagctagattttatttcaattgtatatt 267
Query: 1410 ccagagtaaatgaaagaatcatagcaaattgtgatagtgtaaaaattatagactaaaaca 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ccagagtaaatgaaagaatcatagcaaattgtgatagtgtaaaaattatagactaaaaca 207
Query: 1470 ttttgatgtatttcatttctagggattttcatagatgctctttttataacaataattttg 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ttttgatgtatttcatttctagggattttcatagatgctctttttataacaataattttg 147
Query: 1530 caattttaataaattggcaatacattattgatatctattattaaatattgaaaatatatt 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 caattttaataaattggcaatacattattgatatctattattaaatattgaaaatatatt 87
Query: 1590 ttataagttgatatatgcataaacagagaactatttaacaaattacctcattaaaattaa 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 ttataagttgatatatgcataaacagagaactatttaacaaattacctcattaaaattaa 27
Query: 1650 agaag 1654
|||||
Sbjct: 26 agaag 22
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 266,147
Number of extensions: 5993
Number of successful extensions: 5993
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5993
Number of HSP's successfully gapped: 1
Length of query: 1654
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1637
Effective length of database: 8,119,229
Effective search space: 13291177873
Effective search space used: 13291177873
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)