BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05418 (UTR included)
(5947 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047A1D04 1411 0.0
>BF01047A1D04
Length = 760
Score = 1411 bits (712), Expect = 0.0
Identities = 743/752 (98%), Gaps = 1/752 (0%)
Strand = Plus / Plus
Query: 4984 agacggaacaggcacagaaaaaggccaacgaaacgatggatgaggtggagggtcttcgtt 5043
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 agactgaacaggcacagaaaaaggccaacgaaacgatggatgaggtggagggtcttcgtt 68
Query: 5044 cgcggctttctgacttacagaaaaatattctaaaaatagaaagtgacgcagagcaagtga 5103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 cgcggctttctgacttacagaaaaatattctaaaaatagaaagtgacgcagagcaagtga 128
Query: 5104 aacaagaagctaatgacgtcgtcaacaaagcagaaggagcggaacaaaaagccagacagt 5163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aacaagaagctaatgacgtcgtcaacaaagcagaaggagcggaacaaaaagccagacagt 188
Query: 5164 tgagacaggactttaagcagacgaacacgtccctcaccgaaagagccaatcagacttcca 5223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tgagacaggactttaagcagacgaacacgtccctcaccgaaagagccaatcagacttcca 248
Query: 5224 gttctagagaacgagctcagctgctgctgaatcgggccacaaaactcgcgagtgacacac 5283
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 249 gttctagagaacgagctcagctactgctgaatcgggccacaaaactcgcgagtgacacac 308
Query: 5284 agagtcagctgaagctcctcgcgaacatggaagaactgtacaacgatcacaacgaacagc 5343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 agagtcagctgaagctcctcgcgaacatggaagaactgtacaacgatcacaacgaacagc 368
Query: 5344 tcaacgacctggagaaggaaatcggcgaactcaacaccaagatgaactattacctatcag 5403
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 369 tcaacgacctggagaaggaaatcggcgaactcaacaccaagatgaactactacctgtcag 428
Query: 5404 aaataaccaaacgatctgactactaccggtcctgcaccacataaaacaccttcatactca 5463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaataaccaaacgatctgactactaccggtcctgcaccacataaaacaccttcatactca 488
Query: 5464 aagcaatgctttgtactaaacaaattgtatttctataccttaatgtttaaaaatttcct- 5522
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aagcaacgctttgtactaaacaaattgtatttctataccttaatgtttaaaaatttccta 548
Query: 5523 aaaaaaaatgttacttaaaatgcatttattttaattatgtacaattacgtatcaatttat 5582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aaaaaaaatgttacttaaaatgcatttattttaattatgtacaattacgtatcaatttat 608
Query: 5583 tatgcagtcgttgtatctgtgtatgttttattccttgtatatagtcgacctattgtattc 5642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tatgcagtcgttgtatctgtgtatgttttattccttgtatatagtcgacctattgtattc 668
Query: 5643 gccggtagctcgcggaggctgtagggtgtgatgtcttatgctaacgccgcgttcattgtg 5702
|||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 669 gccggtagctcgcggaggctgtagggagtgatgtcttatgttaacgtcgcgttcattgtg 728
Query: 5703 tgtcatcgctaacattacttgtatgtgttata 5734
||||||||||||||||||||||||||||||||
Sbjct: 729 tgtcatcgctaacattacttgtatgtgttata 760
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 539,986
Number of extensions: 8584
Number of successful extensions: 8584
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8583
Number of HSP's successfully gapped: 1
Length of query: 5947
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5929
Effective length of database: 8,109,745
Effective search space: 48082678105
Effective search space used: 48082678105
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)