BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05419 (UTR included)
(9538 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047A1D04 1152 0.0
>BF01047A1D04
Length = 760
Score = 1152 bits (581), Expect = 0.0
Identities = 600/605 (99%), Gaps = 1/605 (0%)
Strand = Plus / Plus
Query: 1 tacagaaaaatattctaaaaatagaaagtgacgcagagcaagtgaaacaagaagctaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tacagaaaaatattctaaaaatagaaagtgacgcagagcaagtgaaacaagaagctaatg 143
Query: 61 acgtcgtcaacaaagcagaaggagcggaacaaaaagccagacagttgagacaggacttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 acgtcgtcaacaaagcagaaggagcggaacaaaaagccagacagttgagacaggacttta 203
Query: 121 agcagacgaacacgtccctcaccgaaagagccaatcagacttccagttctagagaacgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 agcagacgaacacgtccctcaccgaaagagccaatcagacttccagttctagagaacgag 263
Query: 181 ctcagctgctgctgaatcgggccacaaaactcgcgagtgacacacagagtcagctgaagc 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcagctactgctgaatcgggccacaaaactcgcgagtgacacacagagtcagctgaagc 323
Query: 241 tcctcgcgaacatggaagaactgtacaacgatcacaacgaacagctcaacgacctggaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcctcgcgaacatggaagaactgtacaacgatcacaacgaacagctcaacgacctggaga 383
Query: 301 aggaaatcggcgaactcaacaccaagatgaactattacctatcagaaataaccaaacgat 360
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 384 aggaaatcggcgaactcaacaccaagatgaactactacctgtcagaaataaccaaacgat 443
Query: 361 ctgactactaccggtcctgcaccacataaaacaccttcatactcaaagcaatgctttgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 444 ctgactactaccggtcctgcaccacataaaacaccttcatactcaaagcaacgctttgta 503
Query: 421 ctaaacaaattgtatttctataccttaatgtttaaaaatttcct-aaaaaaaatgttact 479
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 504 ctaaacaaattgtatttctataccttaatgtttaaaaatttcctaaaaaaaaatgttact 563
Query: 480 taaaatgcatttattttaattatgtacaattacgtatcaatttattatgcagtcgttgta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taaaatgcatttattttaattatgtacaattacgtatcaatttattatgcagtcgttgta 623
Query: 540 tctgtgtatgttttattccttgtatatagtcgacctattgtattcgccggtagctcgcgg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tctgtgtatgttttattccttgtatatagtcgacctattgtattcgccggtagctcgcgg 683
Query: 600 aggct 604
|||||
Sbjct: 684 aggct 688
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 103,706
Number of extensions: 12002
Number of successful extensions: 12002
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12001
Number of HSP's successfully gapped: 1
Length of query: 9538
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 9520
Effective length of database: 8,109,745
Effective search space: 77204772400
Effective search space used: 77204772400
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)