BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05435 (UTR included)
(2047 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013B2H01 1225 0.0
BF14_3046_C1 80 2e-14
BF01024A2B03 68 6e-11
>BF01013B2H01
Length = 627
Score = 1225 bits (618), Expect = 0.0
Identities = 624/627 (99%)
Strand = Plus / Plus
Query: 503 gtctcgggtttgtcacgctgccggtcacaagttcataccgaatcaaattaaagaggacga 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctcgggtttgtcacgctgccggtcacaagttcataccgaatcaaattaaagaggacnn 60
Query: 563 tctgtatggaggaatatcgaacgttctttcagtcataaggcccgagtggccttcggagaa 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgtatggaggaatatcgaacgttctttcagtcataaggcccgagtggccttcggagaa 120
Query: 623 cattaaatacaagttatttactgatggaataacaaataaattagtagcttgccaattaaa 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cattaaatacaagttatttactgatggaataacaaataaattagtagcttgccaattaaa 180
Query: 683 atcaggggatgaaattttgctcgtaaggatctatggaaacaaaacggatctcttgattga 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcaggggatgaaattttgctcgtaaggatctatggaaacaaaacggatctcttgattga 240
Query: 743 cagagatgctgaaataagaaacatcaccctgttaaacaaagagggtttggcgccaaaaat 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagagatgctgaaataagaaacatcaccctgttaaacaaagagggtttggcgccaaaaat 300
Query: 803 atatggtgtttttaaaaatggtctagtctatgaatattaccctggggtgactctgaacac 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atatggtgtttttaaaaatggtctagtctatgaatattaccctggggtgactctgaacac 360
Query: 863 ggaaactgttacagacactaaaatatcaacattggtcgcacgacaaatggctaagatgca 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaaactgttacagacactaaaatatcaacattggtcgcacgacaaatggctaagatgca 420
Query: 923 caaagtacaactcggacctgaaacaaagaaagagccaatgatttgggataaaatagaaca 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caaagtacaactcggacctgaaacaaagaaagagccaatgatttgggataaaatagaaca 480
Query: 983 attcctgaaactgattcccgaagaatattcagatcctcacaagcagtccaggttcgagcg 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attcctgaaactgattcccgaagaatattcagatcctcacaagcagtccaggttcgagcg 540
Query: 1043 cagcttcgggtcgtcgtccaggctgtggtcggagtaccgcgagctgcggcggcggctggc 1102
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagcttcgggtngtcgtccaggctgtggtcggagtaccgcgagctgcggcggcggctggc 600
Query: 1103 ggagtgcagcagtccgctggtgttcgc 1129
|||||||||||||||||||||||||||
Sbjct: 601 ggagtgcagcagtccgctggtgttcgc 627
>BF14_3046_C1
Length = 1016
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 50 cactggaatcgtggaatgttttgccaatgtcaacgcttttatattttggacgaactataa 109
||||||||||||||||| ||||||||||||||||| |||||| | ||||| ||| |||||
Sbjct: 999 cactggaatcgtggaatattttgccaatgtcaacgtttttatttgttggaggaattataa 940
Query: 110 tcttgagtacagtgtg 125
|| |||||| |||||
Sbjct: 939 actcgagtactgtgtg 924
>BF01024A2B03
Length = 724
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 50 cactggaatcgtggaatgttttgccaatgtcaacgcttttatattttggacgaactataa 109
|||||||||||| |||| ||||||||||||||||| |||||| | | ||||||| |||||
Sbjct: 308 cactggaatcgttgaatattttgccaatgtcaacgtttttatttgtaggacgaattataa 249
Query: 110 tc 111
||
Sbjct: 248 tc 247
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 228,894
Number of extensions: 4357
Number of successful extensions: 4357
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4357
Number of HSP's successfully gapped: 3
Length of query: 2047
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2030
Effective length of database: 8,119,229
Effective search space: 16482034870
Effective search space used: 16482034870
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)