BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05489 (UTR included)
(2164 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010A2D06 1259 0.0
>BF01010A2D06
Length = 771
Score = 1259 bits (635), Expect = 0.0
Identities = 644/647 (99%)
Strand = Plus / Plus
Query: 522 tcgctagcggcagctcaagtgcaggaagtgagatcgataactcgcatcgaacgtattggt 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 tcgctagcggcagctcaagtgcaggaagtgagatcgataactcgcatcgaacgtattggt 155
Query: 582 gcacattcacacatccgcggcctgggactcgatgatgcgttggaaccgcgagccatctct 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gcacattcacacatccgcggcctgggactcgatgatgcgttggaaccgcgagccatctct 215
Query: 642 cagggtatggtggggcagaagatggctaggaaggcggctggcgtcatccttcagatgatt 701
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 216 cagggtatggtggggcagaagatggctaggaaggcggctggcgtcatcctgcagatgatt 275
Query: 702 cgagaaggcaaaattgccggtcgtgcggtattattagctggtcaacctggtacagggaag 761
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 276 cgagaaggcaaaattgccggtcgtgcggtattactagccggtcaacctggtacagggaag 335
Query: 762 accgccatcgctatgggcctcgctcaagctctcggacccgacactcccttcacaagcatg 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 accgccatcgctatgggcctcgctcaagctctcggacccgacactcccttcacaagcatg 395
Query: 822 gccggttccgagatctattcgttggaaatgagcaaaacggaagccctcacacaggccata 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gccggttccgagatctattcgttggaaatgagcaaaacggaagccctcacacaggccata 455
Query: 882 aggaaatctattggaataagaatcaaagaagaatccgagataattgagggtgaggtggtg 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aggaaatctattggaataagaatcaaagaagaatccgagataattgagggtgaggtggtg 515
Query: 942 gaggtggttgtggaacgagcagccggtggaggcggagctaagtctgggagattgacactt 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaggtggttgtggaacgagcagccggtggaggcggagctaagtctgggagattgacactt 575
Query: 1002 aagacatcggacatggaaacaaattacgatatgggagccaagatgatcgactcgctgctg 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aagacatcggacatggaaacaaattacgatatgggagccaagatgatcgactcgctgctg 635
Query: 1062 aaggaaaaggtgcaagccggtgacgtcataaccatagacaaggcgaccggtaagataaat 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aaggaaaaggtgcaagccggtgacgtcataaccatagacaaggcgaccggtaagataaat 695
Query: 1122 aagctgggtaggagctttgcccgcgccagggactacgatgccacagg 1168
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 aagctgggtaggagctttgcccgcgccagggactacgatgccacagg 742
Score = 93.7 bits (47), Expect = 1e-18
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 324 atatctttacaaagtctagtgatactgtgaagtgataaaaaatggct 370
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 atatctttacaaagtctagtgatactgtgaagtgataaaaaatggct 95
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 312,764
Number of extensions: 12817
Number of successful extensions: 12817
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12817
Number of HSP's successfully gapped: 2
Length of query: 2164
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2147
Effective length of database: 8,119,229
Effective search space: 17431984663
Effective search space used: 17431984663
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)