BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05498 (UTR included)
(1447 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B2B08 105 2e-22
BF01011A1B08 84 7e-16
BF14_736_C1 82 3e-15
BF01026A1A12 78 4e-14
>BF01054B2B08
Length = 807
Score = 105 bits (53), Expect = 2e-22
Identities = 83/93 (89%)
Strand = Plus / Plus
Query: 2 agaagatcggcgtgaagtagcctttaatgaccgcgtatcgtatgatgagtccgagagccg 61
||||||||||||| ||| || |||||||| | |||| |||| ||||||| ||||||||
Sbjct: 656 agaagatcggcgtaaagcagtctttaatggctgcgtttcgttcgatgagtgagagagccg 715
Query: 62 gttgccctttccctgttcccaccctttcctgcc 94
|||||||||||||||||||||||||||||||||
Sbjct: 716 gttgccctttccctgttcccaccctttcctgcc 748
>BF01011A1B08
Length = 853
Score = 83.8 bits (42), Expect = 7e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 2 agaagatcggcgtgaagtagcctttaatgaccgcgtatcgtatgatgagtccgagagccg 61
|||||||||||||||||||| | |||||||| |||| |||| |||||| | || |||||
Sbjct: 100 agaagatcggcgtgaagtagtcattaatgactgcgtttcgtctgatgaatgagaaagccg 41
Query: 62 gttgccctttccctgttcccaccctt 87
||||||||||||| |||||||||||
Sbjct: 40 tttgccctttcccttttcccaccctt 15
>BF14_736_C1
Length = 796
Score = 81.8 bits (41), Expect = 3e-15
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 2 agaagatcggcgtgaagtagcctttaatgaccgcgtatcgtatgatgagtccgagagccg 61
|||||||||||||||||||| ||||| || | |||| |||| |||||| ||||||||
Sbjct: 662 agaagatcggcgtgaagtagtctttagtggctgcgtttcgtccaatgagtgagagagccg 721
Query: 62 gttgccctttccctgttcccaccctttcctgcc 94
|||||||||||| |||| ||||||||||||||
Sbjct: 722 gttgccctttccgcgttctcaccctttcctgcc 754
>BF01026A1A12
Length = 759
Score = 77.8 bits (39), Expect = 4e-14
Identities = 72/82 (87%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 2 agaagatcggcgtgaagtagcctttaatgaccgcgtatcgtatgatgagtccgagagccg 61
||||||||||||||||||||||||||||| | | | |||| |||||||| ||||||||
Sbjct: 437 agaagatcggcgtgaagtagcctttaatggctgtttttcgtctgatgagt--gagagccg 494
Query: 62 gttgccctttccctgttcccac 83
||||||||| |||| |||||||
Sbjct: 495 gttgcccttacccttttcccac 516
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 244,968
Number of extensions: 11680
Number of successful extensions: 11680
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 11679
Number of HSP's successfully gapped: 4
Length of query: 1447
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1430
Effective length of database: 8,119,229
Effective search space: 11610497470
Effective search space used: 11610497470
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)