BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05508 (UTR included)
(4540 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2430_C1 109 4e-23
BF01025B1E11 105 6e-22
BF14_1645_C1 94 2e-18
BF14_1695_C1 78 1e-13
>BF14_2430_C1
Length = 830
Score = 109 bits (55), Expect = 4e-23
Identities = 85/95 (89%)
Strand = Plus / Plus
Query: 229 aagttaatcccggaccgtgtgtcctccatcctacacgacagtatcagaatatactgtgca 288
|||||||||||||| ||||| |||||||| |||||||||| | ||||||||||||||||
Sbjct: 145 aagttaatcccggatcgtgtttcctccattctacacgacactggcagaatatactgtgca 204
Query: 289 cgtctttgcacagatgaaggccatattttaaacaa 323
| ||||||||| ||||||||||||||| ||||||
Sbjct: 205 catctttgcacgtatgaaggccatatttaaaacaa 239
>BF01025B1E11
Length = 786
Score = 105 bits (53), Expect = 6e-22
Identities = 90/101 (89%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 227 aaaagttaatcccggaccgtgtgtcctccatcctacacgacagtatcagaatatactgtg 286
|||||||||||||||| ||||| |||||||| |||||||| | | ||||||||| ||||
Sbjct: 179 aaaagttaatcccggatcgtgtttcctccattctacacgatactggcagaatatattgtg 238
Query: 287 cacgtctttgcacagatgaaggccatattttaaacaaacaa 327
|||||| |||||| ||||||||||||| |||||||||||||
Sbjct: 239 cacgtccttgcacggatgaaggccata-tttaaacaaacaa 278
>BF14_1645_C1
Length = 793
Score = 93.7 bits (47), Expect = 2e-18
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 227 aaaagttaatcccggaccgtgtgtcctccatcctacacgacagtatcagaatatactgtg 286
|||||||||||||||| |||| |||||||| |||||||||| | ||||||||||||||
Sbjct: 93 aaaagttaatcccggatcgtgcctcctccattctacacgacactggcagaatatactgtg 152
Query: 287 cacgtctttgcacagatgaaggccata 313
|||||||| |||| | |||||||||||
Sbjct: 153 cacgtcttggcacgggtgaaggccata 179
>BF14_1695_C1
Length = 1407
Score = 77.8 bits (39), Expect = 1e-13
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 246 tgtgtcctccatcctacacgacagtatcagaatatactgtgcacgtctttgcacagatga 305
|||||||| ||| ||||| |||| | ||||||||||||||||||||||||||| |||||
Sbjct: 1169 tgtgtccttcattctacatgacactggcagaatatactgtgcacgtctttgcacggatga 1228
Query: 306 aggccatattttaaa 320
| |||||||| ||||
Sbjct: 1229 atgccatattataaa 1243
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 479,899
Number of extensions: 8574
Number of successful extensions: 8574
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 8573
Number of HSP's successfully gapped: 4
Length of query: 4540
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4522
Effective length of database: 8,109,745
Effective search space: 36672266890
Effective search space used: 36672266890
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)