BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05517 (UTR included)
(2848 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B1B09 1312 0.0
BF01055A1E04 1086 0.0
>BF01039B1B09
Length = 711
Score = 1312 bits (662), Expect = 0.0
Identities = 698/711 (98%)
Strand = Plus / Plus
Query: 823 aagcgaaaacactgggttatgtcggcttgggttttaattcagccaggaatatgagaggag 882
|||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 aagcgaaaactcttggttatgtcggcttgnnntttaattcagccaggaatatgagaggag 60
Query: 883 ccgatctcgttgtcgcctgggtggacgacagacatctcaacgctcaagtcctggactgcc 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgatctcgttgtcgcctgggtggacgacagacatctcaacgctcaagtcctggactgcc 120
Query: 943 atggtcttacgttcgaagacagagctgtcgcagacgagatacagaactacgagctgataa 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggtcttacgttcgaagacagagctgtcgcagacgagatacagaactacgagctgataa 180
Query: 1003 ctggttaccaaaacgctacccatactaccatcgagttcaggcggctgttgcttacgtgtg 1062
||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 181 ctggttaccaaaacgttacccacactaccatcgagttcaggcggctgttgcttacgtgcg 240
Query: 1063 atagacaggacttcgttattggggaagacacaacccaagtgctctgggctatgggtccgg 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atagacaggacttcgttattggggaagacacaacccaagtgctctgggctatgggtccgg 300
Query: 1123 atggttctgatggagaccttccacgacattttaacgtcgtttccagacctctaagactgt 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atggttctgatggagaccttccacgacattttaacgtcgtttccagacctctaagactgt 360
Query: 1183 tgcagccaccttccaagcccgccagcaagttgatgcactgggatgttaggatcagcaatc 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcagccaccttccaagcccgccagcaagttgatgcactgggatgttaggatcagcaatc 420
Query: 1243 tgacgattcctcacgttatggccacattgttctggtgtaaagtatttaaagcaccggaag 1302
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgacaattcctcacgttatggccacattgttctggtgtaaagtatttaaagcaccggaag 480
Query: 1303 ttccaactaaacaccacatagtcggctacgagcctttgatagatagtcgaccaattcgaa 1362
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttccaaccaaacaccacatagtcggctacgagcctttgatagatagtcgaccaattcgaa 540
Query: 1363 atgggagacctattttggaaaagaacaacctgtctccagtacatcatatggtgctgtatg 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgggagacctattttggaaaagaacaacctgtctccagtacatcatatggtgctgtatg 600
Query: 1423 aatgcgctgaagataatgacagaaaacagtggaatgagtgggcggaaggtgatggcttct 1482
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 601 aatgcgctgaagataatgacagaaaacagtggaacgagtgggcggaaggcgatggcttct 660
Query: 1483 ttggtccaacgagacctggtgaatttggactttgcgttaccccaatcgcgg 1533
|||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttggtccaactagacctggtgaatttggactttgcgttaccccaatcgcgg 711
>BF01055A1E04
Length = 823
Score = 1086 bits (548), Expect = 0.0
Identities = 554/556 (99%)
Strand = Plus / Plus
Query: 1949 tgacgctcgctatcaacaatctcgtattgtgcctggaggcagaaaatttttccaaggaga 2008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tgacgctcgctatcaacaatctcgtattgtgcctggaggcagaaaatttttccaaggaga 71
Query: 2009 cattttaataacagaatgtacttatgacagcacttcgagagataagccaattataggagg 2068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cattttaataacagaatgtacttatgacagcacttcgagagataagccaattataggagg 131
Query: 2069 gtactctgctacacaggaaatgtgtctgtcattcgttctatactatcctcgtactgagct 2128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gtactctgctacacaggaaatgtgtctgtcattcgttctatactatcctcgtactgagct 191
Query: 2129 ggccggttgctattcgaacacacccgtcgttgaattctttgaaactttcggcgttaaaga 2188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggccggttgctattcgaacacacccgtcgttgaattctttgaaactttcggcgttaaaga 251
Query: 2189 attctacggtttgtctatgcttcatttggagaagatattctttatgaccgggtttgacgt 2248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 attctacggtttgtctatgcttcatttggagaagatattctttatgaccgggtttgacgt 311
Query: 2249 attacctcctgaatccatcttaccacacttaagacacaatgatcaaggacctgtacgcga 2308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 attacctcctgaatccatcttaccacacttaagacacaatgatcaaggacctgtacgcga 371
Query: 2309 gggagacgatcaaggagtggggttgatgaagggtctagttatcaaggaacctttggaatt 2368
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 372 gggagacgatcaaggagtagggttgatgaagggtctagttatcaaggagcctttggaatt 431
Query: 2369 ccacaacaagacgttcatggaccatttgaatgaaatgccgtggtcagagcccttgctcac 2428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ccacaacaagacgttcatggaccatttgaatgaaatgccgtggtcagagcccttgctcac 491
Query: 2429 ggaacaaatagaaaaaaaattgtatagcggcttccacatgaccttctgcaagaaaagaga 2488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ggaacaaatagaaaaaaaattgtatagcggcttccacatgaccttctgcaagaaaagaga 551
Query: 2489 cgactcctggggaact 2504
||||||||||||||||
Sbjct: 552 cgactcctggggaact 567
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 308,674
Number of extensions: 5628
Number of successful extensions: 5628
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5628
Number of HSP's successfully gapped: 2
Length of query: 2848
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2831
Effective length of database: 8,119,229
Effective search space: 22985537299
Effective search space used: 22985537299
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)