BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05527 (UTR included)
(3085 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B1C07 698 0.0
>BF01019B1C07
Length = 372
Score = 698 bits (352), Expect = 0.0
Identities = 368/372 (98%), Gaps = 1/372 (0%)
Strand = Plus / Plus
Query: 1808 cagcttgtatagcttcgcggagttgttctcctacatg-ctggctgaaaggacgagaccgc 1866
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 cagcttgtacagcttcgcggagttgttctcctacatgtctggctgaaaggacgagaccgc 60
Query: 1867 cgcttagaggtcgaatagttcctccggtgacgttcgaggacatagatccagtgttcgtga 1926
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgcttacaggtcgaatagttcctccggtgacgttcgaggacatagatccagtgttcgtga 120
Query: 1927 aagcgttgtcggaaatacacaggggcatggagttactagagtcaaaattaactatcgaca 1986
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 aagcgttgtcggaaatacacaggggcatggagttactagagtctaaattaactatcgaca 180
Query: 1987 gggagcagacacttgtgacgttacagcgagtgctagttatatctctacaccttgctgcgc 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggagcagacacttgtgacgttacagcgagtgctagttatatctctacaccttgctgcgc 240
Query: 2047 tcatggcaagactgctggaggagccggggtgcaccgacgacgtctccaggaagatacata 2106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcatggcaagactgctggaggagccggggtgcaccgacgacgtctccaggaagatacata 300
Query: 2107 aggctgtttactcactggttaaattagacattaaggtccgtcaaggtcgctcagcgctcc 2166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggctgtttactcactggttaaattagacattaaggtccgtcaaggtcgctcagcgctcc 360
Query: 2167 acgtggcgtgtt 2178
||||||||||||
Sbjct: 361 acgtggcgtgtt 372
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 380,609
Number of extensions: 15477
Number of successful extensions: 15477
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15476
Number of HSP's successfully gapped: 1
Length of query: 3085
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3067
Effective length of database: 8,109,745
Effective search space: 24872587915
Effective search space used: 24872587915
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)