BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05559 (UTR included)
(2059 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053A1A04 1578 0.0
>BF01053A1A04
Length = 829
Score = 1578 bits (796), Expect = 0.0
Identities = 815/820 (99%), Gaps = 1/820 (0%)
Strand = Plus / Plus
Query: 218 tacatggcaagaggttaaaatcggctatcatttttatattttatatttatacaaaatgaa 277
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 11 tacatgacaagaggttaaaatcggctatcatttttatattttatgtttatacaaaatgaa 70
Query: 278 atctattcgctttattcgtaaatattcacaaaatccttccagaagggttgtagtcaccgg 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atctattcgctttattcgtaaatattcacaaaatccttccagaagggttgtagtcaccgg 130
Query: 338 tttgggaatagtttcgcctcttggaacaaataccttaaagtcatggcaaaaccttttaaa 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tttgggaatagtttcgcctcttggaacaaataccttaaagtcatggcaaaaccttttaaa 190
Query: 398 aggacaaagtggaatagtctctcttaaggatgaggaatatttaaaattacctagtcaaat 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aggacaaagtggaatagtctctcttaaggatgaggaatatttaaaattacctagtcaaat 250
Query: 458 agctggtaaaataccagatgaagacaatcctgctttatcaaaaatgatgtcaaaatctaa 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agctggtaaaataccagatgaagacaatcctgctttatcaaaaatgatgtcaaaatctaa 310
Query: 518 tttaaaattaatggccccagctacttgcttagctctttttgccactgaagaagctttaaa 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tttaaaattaatggccccagctacttgcttagctctttttgccactgaagaagctttaaa 370
Query: 578 tgatgcaaagtgggtgccacaactagaatcagatatggaatcaacaggagtcactttagg 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgatgcaaagtgggtgccacaactagaatcagatatggaatcaacaggagtcactttagg 430
Query: 638 aatgggtatgatagatcttaaggatgtttgtgatacaaataatgctctacaatcaggcta 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aatgggtatgatagatcttaaggatgtttgtgatacaaataatgctctacaatcaggcta 490
Query: 698 caataaagtaagtccatttttcgtaccaagaatactaccaaacatggcagcaggacatat 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 caataaagtaagtccatttttcgtaccaagaatactaccaaacatggcagcaggacatat 550
Query: 758 aagtataaaatatggatttagggggccaaatcatgctgtttcaacagcatgtgcaactgg 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aagtataaaatatggatttagggggccaaatcatgctgtttcaacagcatgtgcaactgg 610
Query: 818 agcacattctattggtgatgcctttagatttatcagaaatggagatgccgatgtcatggt 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 agcacattctattggtgatgcctttagatttatcagaaatggagatgccgatgtcatggt 670
Query: 878 aagtggtggagcagaggcctgtataagtccattagccatagcagggttctgtcggttaag 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aagtggtggagcagaggcctgtataagtccattagccatagcagggttctgtcggttaag 730
Query: 938 agctttaagcacctcattcaatgataaacctaccatggcttctaggccctttgataaaaa 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 731 agctttaagcacctcattcaatgataaacctaccatggcttctaggccctttgat-aaaa 789
Query: 998 tagagatggatttgttatgggcgagggagctgctgtttta 1037
||||||||||||||||||||| || |||||||||||||||
Sbjct: 790 tagagatggatttgttatgggtgaaggagctgctgtttta 829
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 297,264
Number of extensions: 6192
Number of successful extensions: 6192
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6191
Number of HSP's successfully gapped: 1
Length of query: 2059
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2042
Effective length of database: 8,119,229
Effective search space: 16579465618
Effective search space used: 16579465618
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)