BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05571 (UTR included)
(3283 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041B2D09 248 5e-65
BF01054B2B08 84 2e-15
BF01048A1E10 68 1e-10
>BF01041B2D09
Length = 749
Score = 248 bits (125), Expect = 5e-65
Identities = 134/137 (97%)
Strand = Plus / Plus
Query: 1761 aattggaagcttctcataaacactctgacgagtgaccagtacaccctcatcccggtcgaa 1820
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aattggaagcttctcatacagactctgacgagtgaccagtacaccctcatcccggtcgaa 379
Query: 1821 ggtcgagtgcagttgctgtccgacgcttttgagctggcgtggaacaatcagctcgactat 1880
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggtcgagtgcagttgctatccgacgcttttgagctggcgtggaacaatcagctcgactat 439
Query: 1881 ggaatgactttacagtt 1897
|||||||||||||||||
Sbjct: 440 ggaatgactttacagtt 456
>BF01054B2B08
Length = 807
Score = 83.8 bits (42), Expect = 2e-15
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 3088 tctcacagaagatggacgtaaaacagtcttaaatagttgcgttttgtctgacgaatgaga 3147
||||||||||||| | |||||| ||||||| ||| | ||||||| || || || |||||
Sbjct: 650 tctcacagaagatcggcgtaaagcagtctttaatggctgcgtttcgttcgatgagtgaga 709
Query: 3148 gtgtcggttgccctttccctgttcccaccctttc 3181
| | ||||||||||||||||||||||||||||||
Sbjct: 710 gagccggttgccctttccctgttcccaccctttc 743
>BF01048A1E10
Length = 804
Score = 67.9 bits (34), Expect = 1e-10
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 3156 tgccctttccctgttcccaccctttcttcttcctcttccccaatcaagggtggcaactca 3215
|||||||| | | ||||||||||||| | | |||||| ||||| ||||||||||||| ||
Sbjct: 571 tgcccttttcgttttcccaccctttcctatccctctttcccaaacaagggtggcaacaca 512
Query: 3216 tccgcaaaactttgttgc 3233
| ||||||||| ||||||
Sbjct: 511 ttcgcaaaactatgttgc 494
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 299,695
Number of extensions: 4860
Number of successful extensions: 4860
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4860
Number of HSP's successfully gapped: 3
Length of query: 3283
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3265
Effective length of database: 8,109,745
Effective search space: 26478317425
Effective search space used: 26478317425
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)