BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05576 (UTR included)
(1885 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018B1H04 1181 0.0
BF01024A2B02 630 e-180
>BF01018B1H04
Length = 647
Score = 1181 bits (596), Expect = 0.0
Identities = 608/612 (99%)
Strand = Plus / Plus
Query: 399 tttacagaattataaataaataacaacatcctgccgttagtgcatctgcacttgcttcat 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 tttacagaattataaataaataacaacatcctgccgttagtgcatctgcacttgcttcat 95
Query: 459 tataaatctataatatcctttactctacagtttaatttcataatgaccgatgaaagaaac 518
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 96 tataaatctataatatcctttaatctacagtttaatttcataatgaccgatgaaagaaac 155
Query: 519 tttagatcatcgtattacgaaaaagtcggatgtcgaggtgttgaagaaaagaaatcctta 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tttagatcatcgtattacgaaaaagtcggatgtcgaggtgttgaagaaaagaaatcctta 215
Query: 579 gaaatattgatgaaggaaaagccttgggataaggttaagttgaaacagttctgtttgcga 638
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaaatattaatgaaggaaaagccttgggataaggttaagttgaaacagttctgtttgcga 275
Query: 639 ttcactgtgcccgctgcttatagaaatttagtatggaaagtgttacttgatatccttccg 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttcactgtgcccgctgcttatagaaatttagtatggaaagtgttacttgatatccttccg 335
Query: 699 gtctatgctgactcgcatacctttgtagcagagcagagaacagatcaatataatgatatg 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtctatgctgactcgcatacctttgtagcagagcagagaacagatcaatataatgatatg 395
Query: 759 ctctatgctgtggaagatctggaactggtggatatgaaagcccctcgaagtgagattttg 818
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 396 ctctatgctgtggaagatctggaactggtggatatgaaagcccctcgaagcgagattttg 455
Query: 819 ctggcgatgtggctgctggaaaatgaggaaaggaaaccaccaaacttcccggagactaat 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ctggcgatgtggctgctggaaaatgaggaaaggaaaccaccaaacttcccggagactaat 515
Query: 879 tactgttctgcagatacgttcataccgatagcaaatactctgctagagctatatgaaaac 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tactgttctgcagatacgttcataccgatagcaaatactctgctagagctatatgaaaac 575
Query: 939 gaggttgatgtttactggctcagcaaaatgttgacggatgttgtgtggaacatgcagaag 998
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 576 gaggttgatgtttactggctcatcaaaatgttgacggatgttgtgtggaacatgcagaag 635
Query: 999 gaactgcctcgc 1010
||||||||||||
Sbjct: 636 gaactgcctcgc 647
>BF01024A2B02
Length = 795
Score = 630 bits (318), Expect = e-180
Identities = 324/326 (99%)
Strand = Plus / Plus
Query: 362 aaaaataatgataaaattgtaaattaaaaatcaaaaatttacagaattataaataaataa 421
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 aaaaataatgaaaagattgtaaattaaaaatcaaaaatttacagaattataaataaataa 69
Query: 422 caacatcctgccgttagtgcatctgcacttgcttcattataaatctataatatcctttac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 caacatcctgccgttagtgcatctgcacttgcttcattataaatctataatatcctttac 129
Query: 482 tctacagtttaatttcataatgaccgatgaaagaaactttagatcatcgtattacgaaaa 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tctacagtttaatttcataatgaccgatgaaagaaactttagatcatcgtattacgaaaa 189
Query: 542 agtcggatgtcgaggtgttgaagaaaagaaatccttagaaatattgatgaaggaaaagcc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 agtcggatgtcgaggtgttgaagaaaagaaatccttagaaatattgatgaaggaaaagcc 249
Query: 602 ttgggataaggttaagttgaaacagttctgtttgcgattcactgtgcccgctgcttatag 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttgggataaggttaagttgaaacagttctgtttgcgattcactgtgcccgctgcttatag 309
Query: 662 aaatttagtatggaaagtgttacttg 687
||||||||||||||||||||||||||
Sbjct: 310 aaatttagtatggaaagtgttacttg 335
Score = 385 bits (194), Expect = e-106
Identities = 197/198 (99%)
Strand = Plus / Plus
Query: 687 gatatccttccggtctatgctgactcgcatacctttgtagcagagcagagaacagatcaa 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gatatccttccggtctatgctgactcgcatacctttgtagcagagcagagaacagatcaa 464
Query: 747 tataatgatatgctctatgctgtggaagatctggaactggtggatatgaaagcccctcga 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tataatgatatgctctatgctgtggaagatctggaactggtggatatgaaagcccctcga 524
Query: 807 agtgagattttgctggcgatgtggctgctggaaaatgaggaaaggaaaccaccaaacttc 866
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 agcgagattttgctggcgatgtggctgctggaaaatgaggaaaggaaaccaccaaacttc 584
Query: 867 ccggagactaattactgt 884
||||||||||||||||||
Sbjct: 585 ccggagactaattactgt 602
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 885 tctgcagatacgttcataccgatagcaaatactctgct 922
||||||||||| ||||||||||||||||||||||||||
Sbjct: 758 tctgcagatacattcataccgatagcaaatactctgct 795
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 240,586
Number of extensions: 5047
Number of successful extensions: 5047
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5047
Number of HSP's successfully gapped: 4
Length of query: 1885
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1868
Effective length of database: 8,119,229
Effective search space: 15166719772
Effective search space used: 15166719772
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)