BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN05583 (UTR included)
         (1774 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01042B2D03                                                          115   2e-25

>BF01042B2D03
          Length = 789

 Score =   bits (58), Expect = 2e-25
 Identities = 155/185 (83%), Gaps = 3/185 (1%)
 Strand = Plus / Minus

                                                                       
Query: 382 ccacagccaagagcagcgcggggcaaggtgcgacgagagtcacggcgggcgacgtgattt 441
           |||||| ||||||| |||  ||||  |||| |||||||||||| |||||||  |||||||
Sbjct: 184 ccacagtcaagagcggcgtagggcgtggtgagacgagagtcacagcgggcggggtgattt 125

                                                                       
Query: 442 --ggtggtatgtcacagctacaacgcgcggtagaaacaaaataatttgttttggtcgcgc 499
             |||||| | ||||||||| |||||||  |||||||||| || |||||||||||| |||
Sbjct: 124 acggtggtgtatcacagctagaacgcgctttagaaacaaatta-tttgttttggtcccgc 66

                                                                       
Query: 500 catgcctgaacatatccaccgatgccagcgcgcgcgccactctgagctgtggccgcctcg 559
            || |||||| ||||||||||||||   |||| ||||| ||||  |||||||||||||||
Sbjct: 65  gatacctgaatatatccaccgatgctgccgcgagcgccgctctaggctgtggccgcctcg 6

                
Query: 560 atact 564
           |||||
Sbjct: 5   atact 1


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 211,505
Number of extensions: 5110
Number of successful extensions: 5110
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5109
Number of HSP's successfully gapped: 1
Length of query: 1774
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1757
Effective length of database: 8,119,229
Effective search space: 14265485353
Effective search space used: 14265485353
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)