BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05598 (UTR included)
(2371 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A2E11 1376 0.0
>BF01042A2E11
Length = 726
Score = 1376 bits (694), Expect = 0.0
Identities = 718/726 (98%)
Strand = Plus / Plus
Query: 303 tgttttataacaccaatctgcatgtcggatgcaatcaaagtgatggtggtttacagtgct 362
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttttataataccaatctgcatgtcggatgcaatcaaagtgatggtggtttacagtgct 60
Query: 363 gcattgattgcagggaaaagcagtcgatatactttgtgatttttgctatttaattataac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcattgattgcagggaaaagcagtcgatatactttgtgatttttgctatttaattataac 120
Query: 423 tttctcgactgtacttccctcgagcaccatcgaccctgttcttgacttctctgaggaaaa 482
||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 121 tttctcgaccgtacttccctcgagcaccatcgaccctattcttgacttctccgaggaaaa 180
Query: 483 ctattttcattgatcaagatgacacaagaagatgaaaacctgtcggagaacgaaccgaat 542
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 ctattttcattgatcaagatgacacaagaagatgaaaacctttcggagaacgaaccgaat 240
Query: 543 attaatagtaatgatgaaaatcggagtaaatcatacagactcacaatggaatttcctcta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attaatagtaatgatgaaaatcggagtaaatcatacagactcacaatggaatttcctcta 300
Query: 603 tttttcaccatgttatctatgtctttatctggagctgcaatcagtaatttaatcctctac 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttttcaccatgttatctatgtctttatctggagctgcaatcagtaatttaatcctctac 360
Query: 663 cgtacttgcgtgcactctttaaaccatacacaacaggagtgccaggtttttctttcgcca 722
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 361 cgtacttgcgtgcactctttaaaccatacacaataggagtgccaggtttttctttcgcca 420
Query: 723 gtgaaaaataatggaagccaggctttggaagaggaagttcagaagtacgcaacctttgtg 782
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgaaaaataatggaagccaggcgttggaagaggaagttcagaagtacgcaacctttgtg 480
Query: 783 tctatggttagaacgataatagagtccgtggcacctgcaatactatctttattccttggt 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctatggttagaacgataatagagtccgtggcacctgcaatactatctttattccttggt 540
Query: 843 gtgtggtctgatagacatggtcgtaaaccattggttgtttggccgctgttgggtatgact 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtgtggtctgatagacatggtcgtaaaccattggttgtttggccgctgttgggtatgact 600
Query: 903 gtaagtggcgctctcatagttgtatacagtatgttagagagtctgggtccatggtggttc 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtaagtggcgctctcatagttgtatacagtatgttagagagtctgggtccatggtggttc 660
Query: 963 atactgactgccatcccggtatctttgtccggagggttcaccgccatgtttactggatca 1022
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atagtgactgccatcccggtatctttgtccggagggttcaccgccatgtttactggatca 720
Query: 1023 ttctgt 1028
||||||
Sbjct: 721 ttctgt 726
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 377,739
Number of extensions: 23858
Number of successful extensions: 23858
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 23858
Number of HSP's successfully gapped: 1
Length of query: 2371
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2354
Effective length of database: 8,119,229
Effective search space: 19112665066
Effective search space used: 19112665066
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)