BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05623 (UTR included)
(1714 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010A1B03 1511 0.0
>BF01010A1B03
Length = 808
Score = 1511 bits (762), Expect = 0.0
Identities = 794/808 (98%)
Strand = Plus / Plus
Query: 86 agctgtgctcttaaataagtgatactataagttatttaaaaacatatttttttaagaaac 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agctgtgctcttaaataagtgatactataagttatttaaaaacatatttttttaagaaac 60
Query: 146 tagtcatatttattgcatttattaacacagaatagagtatgttttgaaaatgccttcata 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagtcatatttattgcatttattaacacagaatagagtatgttttgaaaatgccttcata 120
Query: 206 tattacaagttttattttcacatccttagtatgtcaactaacagtggttttcgctcatga 265
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattacaagtttaattttcacatccttagtatgtcaactaacagtggttttcgctcatga 180
Query: 266 ccacctactcgaaggtatttattgtggtaaagaaaactgttataatgttttgggtgttac 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccacctactcgaaggtatttattgtggtaaagaaaactgttataatgttttgggtgttac 240
Query: 326 aagagaggctactaagagtgaaatatccaaaaattatagacaactggcgaaaaaatacca 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagagaggctactaagagtgaaatatccaaaaattatagacaactggcgaaaaaatacca 300
Query: 386 cccagacaaacatcgcggtgagcaagaaaaaaaagaagccgaggaaaagtttaaagaaat 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cccagacaaacatcgcggtgagcaagaaaaaaaagaagccgaggaaaagtttaaagaaat 360
Query: 446 agcaacggcttatgaaatactaagagacgatgaagaaaggtctgattacaattacatgtt 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcaacggcttatgaaatactaagagacgatgaagaaaggtctgattacaattacatgtt 420
Query: 506 agataatccgcaggaatactatgcccattactatagatattacagacgccgcatggcccc 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agataatccgcaggaatactatgcccattactatagatattacagacgccgcatggcccc 480
Query: 566 aaaggtcgacgttcgaattgttttggctgtgactattactattatatctgtaatacagta 625
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 481 gaaggtcgacgttcgaattgttttggctgtgacaattactattatatctgtaatacagta 540
Query: 626 ctacagcgcgtggtctaaatatgacacggccatcaaatatttcatgacagtacccaagta 685
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctacagctcgtggtctaaatatgacacggccatcaaatatttcatgacagtacccaagta 600
Query: 686 cagacacagggcattagaaaaagctaaagctgacaatatagaaattcaaacaaaagtcaa 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cagacacagggcattagaaaaagctaaagctgacaatatagaaattcaaacaaaagtcaa 660
Query: 746 aggccctaagaaaaataaagctgaactaaaagaggagcaagataggataataagaaaaat 805
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 661 aggccctaagaaaaataaagctgaactaaaagaggagcaagataggataataannnnnat 720
Query: 806 tattgaagaaaacatggacataaaaggtgcttacgctaagcctgagataacaaatatact 865
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 721 tattgaagaaaacatggacatnnnanntgcttacgctaagcctgagataacaaatatact 780
Query: 866 atggatacaaattataatactgccttac 893
||||||||||||||||||||||||||||
Sbjct: 781 atggatacaaattataatactgccttac 808
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 277,315
Number of extensions: 6434
Number of successful extensions: 6434
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6433
Number of HSP's successfully gapped: 1
Length of query: 1714
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1697
Effective length of database: 8,119,229
Effective search space: 13778331613
Effective search space used: 13778331613
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)