BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05624 (UTR included)
(1495 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A1C12 874 0.0
BF01008X1A10 250 6e-66
>BF01029A1C12
Length = 718
Score = 874 bits (441), Expect = 0.0
Identities = 444/445 (99%)
Strand = Plus / Plus
Query: 929 agcgacagatccgaacgcgtggcgtttaggacgaatcgacgaaacagaccacgaaacacc 988
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 274 agcgacagatccgaacgcgtggcgtttaggacgaatcgacgaaacagatcacgaaacacc 333
Query: 989 cgtttgagggcaagcattgcacctagcggtccaaccgcggaaccgtgatcgctagtgcat 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cgtttgagggcaagcattgcacctagcggtccaaccgcggaaccgtgatcgctagtgcat 393
Query: 1049 acatgcattcgagggtaatgatattaacgaacattattacgacgtgaaccgaactgtata 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 acatgcattcgagggtaatgatattaacgaacattattacgacgtgaaccgaactgtata 453
Query: 1109 tgtctctatacataaatggtgttcaaattataacagaccattacccgagaaaaacttttt 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tgtctctatacataaatggtgttcaaattataacagaccattacccgagaaaaacttttt 513
Query: 1169 tataaaaattaaaaggtgataaaaaactatgtacataatcacatcaacgtagatatcata 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tataaaaattaaaaggtgataaaaaactatgtacataatcacatcaacgtagatatcata 573
Query: 1229 gaaagttaaatttttaaattcgggtaaggttgagagactatgaagatttgatatataact 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gaaagttaaatttttaaattcgggtaaggttgagagactatgaagatttgatatataact 633
Query: 1289 ttgatagattaaattgtgaatattgactattttgttatttcgggaaacttttttcaaata 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ttgatagattaaattgtgaatattgactattttgttatttcgggaaacttttttcaaata 693
Query: 1349 agagaaagatgaaagtattttaact 1373
|||||||||||||||||||||||||
Sbjct: 694 agagaaagatgaaagtattttaact 718
>BF01008X1A10
Length = 779
Score = 250 bits (126), Expect = 6e-66
Identities = 135/138 (97%)
Strand = Plus / Plus
Query: 1358 tgaaagtattttaactcaaagagaatgtacgggaacacgcagctattgaaagggttgatt 1417
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 tgaaactattttaactcaaagagaatgttcgggaacacgcagctattgaaagggttgatt 60
Query: 1418 aaattcgcgacatattactgttaataactatattatagcatcttaacaatatccttttaa 1477
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaattcacgacatattactgttaataactatattatagcatcttaacaatatccttttaa 120
Query: 1478 aagctttaattataatca 1495
||||||||||||||||||
Sbjct: 121 aagctttaattataatca 138
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 175,979
Number of extensions: 3381
Number of successful extensions: 3381
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3381
Number of HSP's successfully gapped: 2
Length of query: 1495
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1478
Effective length of database: 8,119,229
Effective search space: 12000220462
Effective search space used: 12000220462
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)