BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05626 (UTR included)
(1180 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046B1B11 474 e-133
BF01014A2F11 432 e-121
>BF01046B1B11
Length = 811
Score = 474 bits (239), Expect = e-133
Identities = 274/289 (94%), Gaps = 15/289 (5%)
Strand = Plus / Plus
Query: 403 acttcggagcgtatagagatacttttatttatagtttttaattgaatatattcgtgttac 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 acttcggagcgtatagagatacttttatttatagtttttaattgaatatattcgtgttac 67
Query: 463 gttcgtgaacaccagtgtgataacgggattttataaatatgagtattgctgacctgatcc 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 gttcgtgaacaccagtgtgataacgggattttataaatatgagtattgctgacctgatcc 127
Query: 523 aagccgctgaatacatcgaaaggcgagatag---------------agaatctgaacacg 567
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 128 aagccgctgaatacatcgaaaggcgagatagagttttttttattgcagaatctgaacacg 187
Query: 568 gttacgcttcgttaccggcgtacgaggagtcccggaccgggggaaggaggcccaagacga 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gttacgcttcgttaccggcgtacgaggagtcccggaccgggggaaggaggcccaagacga 247
Query: 628 agaaatctcagggcagcaggaccacgcataacgaattggaaaaaaacag 676
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 agaaatctcagggcagcaggaccacgcataacgaattggaaaaaaacag 296
>BF01014A2F11
Length = 750
Score = 432 bits (218), Expect = e-121
Identities = 256/272 (94%), Gaps = 15/272 (5%)
Strand = Plus / Plus
Query: 420 gatacttttatttatagtttttaattgaatatattcgtgttacgttcgtgaacaccagtg 479
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3 gatacttttatttatagtttttaattgaatatattcttgttacgttcgtgaacaccagtg 62
Query: 480 tgataacgggattttataaatatgagtattgctgacctgatccaagccgctgaatacatc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgataacgggattttataaatatgagtattgctgacctgatccaagccgctgaatacatc 122
Query: 540 gaaaggcgagatag---------------agaatctgaacacggttacgcttcgttaccg 584
|||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 123 gaaaggcgagatagagttttttttattgcagaatctgaacacggttacgcttcgttaccg 182
Query: 585 gcgtacgaggagtcccggaccgggggaaggaggcccaagacgaagaaatctcagggcagc 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcgtacgaggagtcccggaccgggggaaggaggcccaagacgaagaaatctcagggcagc 242
Query: 645 aggaccacgcataacgaattggaaaaaaacag 676
||||||||||||||||||||||||||||||||
Sbjct: 243 aggaccacgcataacgaattggaaaaaaacag 274
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 176,320
Number of extensions: 3683
Number of successful extensions: 3683
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3683
Number of HSP's successfully gapped: 4
Length of query: 1180
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1163
Effective length of database: 8,119,229
Effective search space: 9442663327
Effective search space used: 9442663327
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)