BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05632 (UTR included)
(1498 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3403_C1 70 1e-11
BF14_2303_C1 70 1e-11
BF14_906_C1 70 1e-11
BF01060A1A06 68 4e-11
BF01033A1E02 68 4e-11
BF01012B1C01 68 4e-11
BF14_1547_C2 68 4e-11
BF14_963_C1 68 4e-11
BF14_548_C1 68 4e-11
>BF14_3403_C1
Length = 1210
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 1351 atatatatatatatatatatatatatatatataaa 1385
|||||||||||||||||||||||||||||||||||
Sbjct: 1170 atatatatatatatatatatatatatatatataaa 1136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1351 atatatatatatatatatatatatatatatataa 1384
||||||||||||||||||||||||||||||||||
Sbjct: 1147 atatatatatatatatatatatatatatatataa 1180
>BF14_2303_C1
Length = 1040
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 1351 atatatatatatatatatatatatatatatataaa 1385
|||||||||||||||||||||||||||||||||||
Sbjct: 1023 atatatatatatatatatatatatatatatataaa 989
>BF14_906_C1
Length = 1629
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1350 gatatatatatatatatatatatatatatatataa 1384
|||||||||||||||||||||||||||||||||||
Sbjct: 1578 gatatatatatatatatatatatatatatatataa 1612
>BF01060A1A06
Length = 737
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 1351 atatatatatatatatatatatatatatatataa 1384
||||||||||||||||||||||||||||||||||
Sbjct: 371 atatatatatatatatatatatatatatatataa 338
>BF01033A1E02
Length = 815
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 1351 atatatatatatatatatatatatatatatataa 1384
||||||||||||||||||||||||||||||||||
Sbjct: 148 atatatatatatatatatatatatatatatataa 115
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1351 atatatatatatatatatatatatatatatataa 1384
||||||||||||||||||||||||||||||||||
Sbjct: 131 atatatatatatatatatatatatatatatataa 164
>BF01012B1C01
Length = 950
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 1351 atatatatatatatatatatatatatatatataa 1384
||||||||||||||||||||||||||||||||||
Sbjct: 935 atatatatatatatatatatatatatatatataa 902
>BF14_1547_C2
Length = 723
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 1350 gatatatatatatatatatatatatatatatata 1383
||||||||||||||||||||||||||||||||||
Sbjct: 712 gatatatatatatatatatatatatatatatata 679
>BF14_963_C1
Length = 1195
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 1350 gatatatatatatatatatatatatatatatata 1383
||||||||||||||||||||||||||||||||||
Sbjct: 1127 gatatatatatatatatatatatatatatatata 1094
>BF14_548_C1
Length = 1701
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1351 atatatatatatatatatatatatatatatataa 1384
||||||||||||||||||||||||||||||||||
Sbjct: 1631 atatatatatatatatatatatatatatatataa 1664
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 253,951
Number of extensions: 16628
Number of successful extensions: 16628
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 16516
Number of HSP's successfully gapped: 11
Length of query: 1498
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1481
Effective length of database: 8,119,229
Effective search space: 12024578149
Effective search space used: 12024578149
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)