BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05644 (UTR included)
(2113 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B1D02 216 1e-55
BF01023A2A12 194 4e-49
BF01052B1H02 174 4e-43
BF01031B1E12 170 6e-42
BF01037B1H08 127 8e-29
BF01040A1G09 123 1e-27
BF01062A1A05 98 7e-20
BF01010B2F09 98 7e-20
>BF01056B1D02
Length = 778
Score = 216 bits (109), Expect = 1e-55
Identities = 156/171 (91%), Gaps = 3/171 (1%)
Strand = Plus / Minus
Query: 1723 atcatcatcatcatcggcctatcagagcccactgctgagcaatggccacttgtcacatgg 1782
|||||||| |||||| ||||||| |||||||||||||||||| |||| ||| |||||||
Sbjct: 746 atcatcattatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacatg- 688
Query: 1783 agaaggttagagcgttaatcaccacgcttgctcaagacgggttggcgattacaatcttat 1842
||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 687 --aaggttagagcattaaccaccacgcttgctcaagacgggttggcgatttcaatcttat 630
Query: 1843 aatttgaaattataaggccaggtttgctcacgatgttttccttcaccgtca 1893
|||||||||||||||| |||||||| ||||||| |||||||||||||||||
Sbjct: 629 aatttgaaattataagaccaggtttcctcacgacgttttccttcaccgtca 579
>BF01023A2A12
Length = 723
Score = 194 bits (98), Expect = 4e-49
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 1723 atcatcatcatcatcggcctatcagagcccactgctgagcaatggccacttgtcacatgg 1782
||||||||||||||| ||||||| |||| ||||||||||||| |||| ||| ||||||||
Sbjct: 348 atcatcatcatcatcagcctatcggagctcactgctgagcaaaggcctcttatcacatgg 289
Query: 1783 agaaggttagagcgttaatcaccacgcttgctcaagacgggttggcgattacaatcttat 1842
||||||||||||| |||||||||||||| ||||||| | | |||| |||| ||| |||||
Sbjct: 288 agaaggttagagcattaatcaccacgctcgctcaaggctgattggtgatttcaaacttat 229
Query: 1843 aatttgaaattataaggccaggtttgctcacgatgttttccttcaccgtc 1892
|||||||||||||||| |||||||| ||||||| ||| ||||||||||||
Sbjct: 228 aatttgaaattataagaccaggtttcctcacgacgttctccttcaccgtc 179
>BF01052B1H02
Length = 790
Score = 174 bits (88), Expect = 4e-43
Identities = 151/172 (87%)
Strand = Plus / Plus
Query: 1721 tcatcatcatcatcatcggcctatcagagcccactgctgagcaatggccacttgtcacat 1780
||||||||| |||||| ||| |||||||||||||| ||||||| ||| || || |||
Sbjct: 261 tcatcatcaccatcattagcccatcagagcccactgttgagcaaacgccttttctcccat 320
Query: 1781 ggagaaggttagagcgttaatcaccacgcttgctcaagacgggttggcgattacaatctt 1840
|||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||
Sbjct: 321 ggagaaagttagagcattaagcaccacgcttgctcaagacgggttggcgatttcaaacta 380
Query: 1841 ataatttgaaattataaggccaggtttgctcacgatgttttccttcaccgtc 1892
|| |||| |||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 381 attatttcaaattataagaccaggtttcctcacgatgttttccttcaccgtc 432
>BF01031B1E12
Length = 730
Score = 170 bits (86), Expect = 6e-42
Identities = 148/166 (89%), Gaps = 2/166 (1%)
Strand = Plus / Minus
Query: 1728 catcatcatcggcctatcagagcccactgctgagcaatggccacttgtcacatggagaag 1787
||||||||| ||||||| |||||||||||||||||| || ||| ||||| |||||||
Sbjct: 216 catcatcataagcctatcggagcccactgctgagcaaatccc-cttctcacacggagaag 158
Query: 1788 gttagagcgttaatcaccacgcttgctcaagacgggttggcgattacaatcttataattt 1847
|||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 157 gttagagcattaatcaccacgcttgctcaagacgggttggcgatttcaatcttatacttt 98
Query: 1848 g-aaattataaggccaggtttgctcacgatgttttccttcaccgtc 1892
| ||| ||||| |||||||| ||||||||||||||| ||||||||
Sbjct: 97 gctaatcataagaccaggtttcctcacgatgttttccctcaccgtc 52
>BF01037B1H08
Length = 758
Score = 127 bits (64), Expect = 8e-29
Identities = 100/112 (89%)
Strand = Plus / Minus
Query: 1726 atcatcatcatcggcctatcagagcccactgctgagcaatggccacttgtcacatggaga 1785
||||||| |||| ||||||| |||||||| ||||||||| |||| ||| ||||||| |||
Sbjct: 349 atcatcaccatcagcctatcggagcccacagctgagcaaaggcctcttctcacatgtaga 290
Query: 1786 aggttagagcgttaatcaccacgcttgctcaagacgggttggcgattacaat 1837
|||||||||| |||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 289 aggttagagcattaagcaccacgcttgctcaagacggggtggcgatttcaat 238
>BF01040A1G09
Length = 753
Score = 123 bits (62), Expect = 1e-27
Identities = 113/130 (86%)
Strand = Plus / Minus
Query: 1724 tcatcatcatcatcggcctatcagagcccactgctgagcaatggccacttgtcacatgga 1783
|||||||||||||| ||||||| || ||||||||||||| ||| ||| || ||||||
Sbjct: 139 tcatcatcatcatcagcctatcggaagccactgctgagcataagcctcttctcgcatgga 80
Query: 1784 gaaggttagagcgttaatcaccacgcttgctcaagacgggttggcgattacaatcttata 1843
||||||| ||| |||||| |||||||||||||||| |||||||||||| ||| ||||||
Sbjct: 79 gaaggtttaagcattaatcgccacgcttgctcaagatgggttggcgatttcaaacttata 20
Query: 1844 atttgaaatt 1853
||||||||||
Sbjct: 19 atttgaaatt 10
>BF01062A1A05
Length = 777
Score = 97.6 bits (49), Expect = 7e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 1747 gagcccactgctgagcaatggccacttgtcacatggagaaggttagagcgttaatcacca 1806
|||||||||||| ||||| |||| ||| ||||| ||||||||||||||| ||||||||||
Sbjct: 585 gagcccactgctaagcaaaggcctcttctcacaaggagaaggttagagcattaatcacca 526
Query: 1807 cgcttgctcaaga 1819
|||||||||||||
Sbjct: 525 cgcttgctcaaga 513
>BF01010B2F09
Length = 764
Score = 97.6 bits (49), Expect = 7e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 1775 tcacatggagaaggttagagcgttaatcaccacgcttgctcaagacgggttggcgattac 1834
||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 308 tcacatggagaaggttagagcattaatcaccacgctcgctcaagacggattggcgatttt 367
Query: 1835 aatcttataattt 1847
||| |||||||||
Sbjct: 368 aattttataattt 380
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,647
Number of extensions: 5161
Number of successful extensions: 5161
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 5157
Number of HSP's successfully gapped: 8
Length of query: 2113
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2096
Effective length of database: 8,119,229
Effective search space: 17017903984
Effective search space used: 17017903984
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)