BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05658 (UTR included)
(2053 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2692_C1 757 0.0
>BF14_2692_C1
Length = 1122
Score = 757 bits (382), Expect = 0.0
Identities = 427/441 (96%), Gaps = 2/441 (0%)
Strand = Plus / Minus
Query: 1 ttcgaaaaacttaaaatcgcatcaatatatacatatttagtcattaaatgtcacattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttcgaaaaacttaaaatcgcatcaatatatacatatttagtcattaaatgtcacattaaa 381
Query: 61 ttttgacactcagctgatgtcgtttattgatttttaaaatcatatattcatgttttattt 120
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 380 ttttgacactcagctgatgtcgtttattgatttttaaaattaaatattcatgttttattt 321
Query: 121 acgttaaa-aaatattagatttatatcatccttacatgtttataaaattagaattattct 179
|||||||| ||||||| ||| |||||||||| || |||||||||||||||||||||||||
Sbjct: 320 acgttaaataaatatt-gatatatatcatccgtaaatgtttataaaattagaattattct 262
Query: 180 ttgtccaaaagtttagtgtcattaatttctttttaaatatttaatatatgcttattattt 239
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtccaaaagtttagtgtcattatttactttttaaatatttaatatatgcttattattt 202
Query: 240 aatataatctgtgcttgaaattattacctagtttataccgacttaacgaattaaattttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatataatctgtgcttgaaattattacctagtttataccgacttaacgaattaaattttt 142
Query: 300 gacatctcgtatttgtgcgatttataaacatgcgaattctaaccgtaaaatttaataaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gacatctcgtatttgtgcgatttataaacatgcgaattctaaccgtaaaatttaataaat 82
Query: 360 agaaatgttatagataaattaaaactgtaaattcgttactatcacacgtaatttctatat 419
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 81 agaaatgttatagataaattaaaactgtaaattcnntactatcacacnnnatttctatat 22
Query: 420 gatcccatatagtttagtttg 440
|||||||||||||||||||||
Sbjct: 21 gatcccatatagtttagtttg 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 249,917
Number of extensions: 5261
Number of successful extensions: 5261
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5260
Number of HSP's successfully gapped: 1
Length of query: 2053
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2036
Effective length of database: 8,119,229
Effective search space: 16530750244
Effective search space used: 16530750244
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)