BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05659 (UTR included)
(9448 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B2F02 111 2e-23
BF01019A1H08 101 2e-20
BF01056B2D01 86 1e-15
BF14_335_C5 86 1e-15
BF14_335_C4 86 1e-15
BF14_335_C2 84 5e-15
BF01017A1F03 78 3e-13
BF14_2442_C1 72 2e-11
BF01048A1E04 70 7e-11
>BF01014B2F02
Length = 623
Score = 111 bits (56), Expect = 2e-23
Identities = 89/100 (89%)
Strand = Plus / Plus
Query: 513 gagacgaaacctctcagcattgcatggatgcaccgtgcgggtgccgggtccatcgttgca 572
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 519 gagacgaaacctctcagcattcagtggatgcaccgtgcgggtgccgggtccagcgttgca 578
Query: 573 gggagaggggtttcaacagtgcctgagacttgcgagccag 612
|||||||| | |||| ||| |||| ||||||||| ||||
Sbjct: 579 gggagaggagcttcagcagcgcctaggacttgcgacccag 618
>BF01019A1H08
Length = 504
Score = 101 bits (51), Expect = 2e-20
Identities = 90/102 (88%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 513 gagacgaaacctctcagcattgcatggatgcaccgtgcgggtgccgggtccat--cgttg 570
|||| ||||||||| |||||| |||||| ||||||||||||||||||||||| |||||
Sbjct: 364 gagatgaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttg 423
Query: 571 cagggagaggggtttcaacagtgcctgagacttgcgagccag 612
|||||||||| | |||||||||||||| || |||||| ||||
Sbjct: 424 cagggagaggagcttcaacagtgcctgggagttgcgacccag 465
>BF01056B2D01
Length = 728
Score = 85.7 bits (43), Expect = 1e-15
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 514 agacgaaacctctcagcattgcatggatgcaccgtgcgggtgccgggtccat--cgttgc 571
||||||||||||||| |||| |||| || ||||||||||||||||||||||| | ||||
Sbjct: 77 agacgaaacctctcaacattccatgaattcaccgtgcgggtgccgggtccatcacattgc 136
Query: 572 agggagaggggtttcaacagtgcctg 597
||||||||| | |||||||| |||||
Sbjct: 137 agggagaggagcttcaacagcgcctg 162
>BF14_335_C5
Length = 1597
Score = 85.7 bits (43), Expect = 1e-15
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 537 tggatgcaccgtgcgggtgccgggtccatcgttgcagggagaggggtttcaacagtgcct 596
||||| ||||||||||||||||||| |||| ||||| ||||||| | |||||||||||||
Sbjct: 1587 tggattcaccgtgcgggtgccgggtgcatctttgcacggagaggagcttcaacagtgcct 1528
Query: 597 gagacttgcga 607
| |||||||||
Sbjct: 1527 gggacttgcga 1517
>BF14_335_C4
Length = 1491
Score = 85.7 bits (43), Expect = 1e-15
Identities = 89/102 (87%), Gaps = 3/102 (2%)
Strand = Plus / Minus
Query: 513 gagacgaaacctctcagcattgcatggatgcaccgtgcgggtgccgggtccat--cgttg 570
||||||||| ||||||||||| ||||||| |||||||||| ||| ||| |||| |||||
Sbjct: 1364 gagacgaaaactctcagcattccatggattcaccgtgcggttgcggggaccatcgcgttg 1305
Query: 571 cagggagaggggtttcaacagtgcctgagacttgcgagccag 612
|| ||||||| | |||||||||||||| ||||||||| ||||
Sbjct: 1304 ca-ggagaggagcttcaacagtgcctgggacttgcgacccag 1264
>BF14_335_C2
Length = 1827
Score = 83.8 bits (42), Expect = 5e-15
Identities = 84/97 (86%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 513 gagacgaaacctctcagcattgcatggatgcaccgtgcgggtgccgggtc--catcgttg 570
|||||||||||||| ||| || |||||| |||||||||||||||||||| | |||||
Sbjct: 808 gagacgaaacctcttagctttctatggattcaccgtgcgggtgccgggtccgccgcgttg 867
Query: 571 cagggagaggggtttcaacagtgcctgagacttgcga 607
|||||||||| | |||||||||||||| || ||||||
Sbjct: 868 cagggagaggagcttcaacagtgcctgggatttgcga 904
>BF01017A1F03
Length = 782
Score = 77.8 bits (39), Expect = 3e-13
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 513 gagacgaaacctctcagcattgcatggatgcaccgtgcgggtgccgggtcc 563
|||||||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 346 gagacgaatcctctcagcattccatggatacaccgtgcgggtgccgggtcc 296
>BF14_2442_C1
Length = 801
Score = 71.9 bits (36), Expect = 2e-11
Identities = 79/92 (85%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 516 acgaaacctctcagcattgcatggatgcaccgtgcgggtgccgggtccatcgttgcaggg 575
||||||||||| |||||| ||||||| ||||||| || ||| || || ||||||||||||
Sbjct: 743 acgaaacctcttagcattccatggattcaccgtgtggttgctggatcaatcgttgcaggg 684
Query: 576 agaggggtttcaacagtgcctgagacttgcga 607
||||| | ||| ||||| ||| ||||||||||
Sbjct: 683 agaggagcttcgacagtacct-agacttgcga 653
>BF01048A1E04
Length = 789
Score = 69.9 bits (35), Expect = 7e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 513 gagacgaaacctctcagcattgcatggatgcaccgtgcgggtgccgggtccatcg 567
|||||||||||||| | | || ||||||| |||||||||||||||||||||||||
Sbjct: 59 gagacgaaacctcttatctttccatggattcaccgtgcgggtgccgggtccatcg 5
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 106,147
Number of extensions: 13277
Number of successful extensions: 13277
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 13273
Number of HSP's successfully gapped: 9
Length of query: 9448
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 9430
Effective length of database: 8,109,745
Effective search space: 76474895350
Effective search space used: 76474895350
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)