BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05660 (UTR included)
(6101 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1134_C1 1522 0.0
BF01056B2G06 1011 0.0
BF01037B1H08 165 1e-39
BF01029A1A09 135 9e-31
BF01056B1D02 109 5e-23
BF01023A2A12 101 1e-20
BF01010B2F09 100 5e-20
BF01052B1H02 86 8e-16
BF01029B2F12 78 2e-13
>BF14_1134_C1
Length = 796
Score = 1522 bits (768), Expect = 0.0
Identities = 789/796 (99%)
Strand = Plus / Plus
Query: 3222 tgcgccggcggggaggacgagcgagcctgcgccgccgcctgcccgaccagcgctaaactc 3281
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcgccggcggggaggacgagcgagcctgcgccgccgcctgcccgaccagcgctaaactg 60
Query: 3282 tgcacgcactcgcaggagtgcctccaaaatgagtggtggtgtgacggggaggtggactgc 3341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcacgcactcgcaggagtgcctccaaaatgagtggtggtgtgacggggaggtggactgc 120
Query: 3342 gcagatggctcggacgaggacaactgtacttctagcgccacgacgatggccactcacgca 3401
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcagatggctcggacgaagacaactgtacttctagcgccacgacgatggccactcacgca 180
Query: 3402 gctgcgaccctggattgcgggacacgtttacgttgtggtggtgtcggtggtggggggtgg 3461
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 gctgcgaccctggattgcgggacacgtttacgttgtggtggtgtcggtggtggagggtgg 240
Query: 3462 tgcgctccgagcgcgtggcgctgcgacggtcggcgtgactgtgccgacgggtcggacgag 3521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcgctccgagcgcgtggcgctgcgacggtcggcgtgactgtgccgacgggtcggacgag 300
Query: 3522 gaggcagggatgtgtcgacacaccgtctgccctccgcccatggtccgctgcggagagaac 3581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaggcagggatgtgtcgacacaccgtctgccctccgcccatggtccgctgcggagagaac 360
Query: 3582 acctgcatcccaccacatctgctctgcgacggtttcagagattgcgctgatggctccgac 3641
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acctgcatcccaccccatctgctctgcgacggtttcagagattgcgctgatggctccgac 420
Query: 3642 gaaaatccactcctttgtagccgtagccgcagtcgctcggagtccttgtgtcctcgtgac 3701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaaatccactcctttgtagccgtagccgcagtcgctcggagtccttgtgtcctcgtgac 480
Query: 3702 caacagctatgcggggacggtcgatgcgcgccagcgaacgctccctgtccctccgagagc 3761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caacagctatgcggggacggtcgatgcgcgccagcgaacgctccctgtccctccgagagc 540
Query: 3762 ggctgcacttggcgcacgtgctcgcagctctgtctgcccaagcacgcgcacaatcacacc 3821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggctgcacttggcgcacgtgctcgcagctctgtctgcccaagcacgcgcacaatcacacc 600
Query: 3822 tgcaaatgcgtggccggatacaagcaacatcagctggcggacggaaccttcacgtgcgag 3881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgcaaatgcgtggccggatacaagcaacatcagctggcggacggaaccttcacgtgcgag 660
Query: 3882 gccacaggtgaaaaggcgaaagtgttggtagcatcgagcggggccctcaaactgctggag 3941
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gccacaggtgagaaggcgaaagtgttggtagcatcgagcggggccctcaaactgctggag 720
Query: 3942 cttcacaagcacgaacacgagccgctggccgccacgccgcactacaacgagaccgtggag 4001
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 721 cttcacaagcatgaacacgagccgctggccgccacgccgcactacaacgagaccgttgag 780
Query: 4002 atagtaagcgtgtgct 4017
||||||||||||||||
Sbjct: 781 atagtaagcgtgtgct 796
>BF01056B2G06
Length = 522
Score = 1011 bits (510), Expect = 0.0
Identities = 519/522 (99%)
Strand = Plus / Plus
Query: 5133 ctgtgtcagcactaccgctgcgtggaccactgcggaccccacgcccgctgtcacgtgctg 5192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtgtcagcactaccgctgcgtggaccactgcggaccccacgcccgctgtcacgtgctg 60
Query: 5193 cccgaaaacgatcacgctcacgtcggcgaccacgacctcccgcccttgacttgcacatgt 5252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccgaaaacgatcacgctcacgtcggcgaccacgacctcccgcccttgacttgcacatgt 120
Query: 5253 tacccgggttggaccggggagcgctgcgacaggcagatagaagcgagcgacacgcgcgac 5312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacccgggttggaccggggagcgctgcgacaggcagatagaagcgagcgacacgcgcgac 180
Query: 5313 aacgaggcgcacacggacgacacgcgacacgaggaccggggcggggcacacggggcggag 5372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacgaggcgcacacggacgacacgcgacacgaggaccggggcggggcacacggggcggag 240
Query: 5373 gacgagtgcgcgaggtgtgagaacggcgcctcctgcgagaggggcccgggcggcgtcacg 5432
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 241 gacgagtgcgcgaggtgtgagaacggagcctcctgcgagaggggcccgggcggcgtcacg 300
Query: 5433 tgtcgctgcacatcgcaatataccggtcctcgctgtacggagtgcgccggcggagccccg 5492
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtcgctgcacttcgcaatataccggtcctcgctgtacggagtgcgccggcggagccccg 360
Query: 5493 ggcgccgcgtgtcgccagagagaagccgagctgtgccgagactactgctacaataatggc 5552
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcgccgcgtgtcgccagagagaagccgagctgtgccgagactactgctacaataatggt 420
Query: 5553 tcgtgttcgttgtcggcgggcgccgtggccggggagcgtgtggcgcagtgctcgtgcgtg 5612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgtgttcgttgtcggcgggcgccgtggccggggagcgtgtggcgcagtgctcgtgcgtg 480
Query: 5613 gcgggctggaccggcgccaggtgtgagctgagagatgatgct 5654
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcgggctggaccggcgccaggtgtgagctgagagatgatgct 522
>BF01037B1H08
Length = 758
Score = 165 bits (83), Expect = 1e-39
Identities = 95/99 (95%)
Strand = Plus / Minus
Query: 5670 gaaagtacatatgactcggaaaagatcacattggtacttgccaggtttcgaacccgcgcc 5729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 gaaagtacatatgactcggaaaagatcacattggtacttgccaggtttcgaacccgcgcc 115
Query: 5730 ctcgtgtatgagaggcgggcctttaacatccaggccaca 5768
|| |||||||||||||||||||||| |||||||||||
Sbjct: 114 ttcacgtatgagaggcgggcctttaacctccaggccaca 76
>BF01029A1A09
Length = 732
Score = 135 bits (68), Expect = 9e-31
Identities = 71/72 (98%)
Strand = Plus / Minus
Query: 6025 aattatataaggtggcaaccggaggttccaggaaaactgcgaaacatacttatatgtata 6084
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 114 aattatataaggtggcaaccggaggttccaggaaaactacgaaacatacttatatgtata 55
Query: 6085 ttataataaaaa 6096
||||||||||||
Sbjct: 54 ttataataaaaa 43
>BF01056B1D02
Length = 778
Score = 109 bits (55), Expect = 5e-23
Identities = 62/63 (98%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 5670 gaaagtacatatgactcggaaaagatcacattggtacttgccaggtttcgaacccgcgcc 5729
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 558 gaaagtacatatgactcggaaaagatcacattggtacttgccaggtttc-aacccgcgcc 500
Query: 5730 ctc 5732
|||
Sbjct: 499 ctc 497
>BF01023A2A12
Length = 723
Score = 101 bits (51), Expect = 1e-20
Identities = 61/63 (96%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 5670 gaaagtacatatgactcggaaaagatcacattggtacttgccaggtttcgaacccgcgcc 5729
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 153 gaaagtacatgtgactcggaaaagatcacattggtacttgccaggtttc-aacccgcgcc 95
Query: 5730 ctc 5732
|||
Sbjct: 94 ctc 92
>BF01010B2F09
Length = 764
Score = 99.6 bits (50), Expect = 5e-20
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 5670 gaaagtacatatgactcggaaaagatcacattggtacttgccaggtttcgaacccgcgcc 5729
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |
Sbjct: 447 gaaagtacatatgactcgatgaagatcacattggtacttgtcaggtttcgaacccgcgac 506
Query: 5730 ctcgtgtatgagaggcgggcctttaacatccaggccac 5767
|| || |||||||| |||||||||| ||||| ||||
Sbjct: 507 ttcacgtgtgagaggctggcctttaacctccagcccac 544
>BF01052B1H02
Length = 790
Score = 85.7 bits (43), Expect = 8e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 5689 aaaagatcacattggtacttgccaggtttcgaacccgcgccctcgtgtatgagaggcggg 5748
||||||||||||| |||||| ||||| |||||||| || ||||| |||| ||||||||||
Sbjct: 479 aaaagatcacattagtacttcccaggattcgaacctgcaccctcatgtacgagaggcggg 538
Query: 5749 cctttaacatccaggccac 5767
|||||||| || |||||||
Sbjct: 539 cctttaacctctaggccac 557
>BF01029B2F12
Length = 749
Score = 77.8 bits (39), Expect = 2e-13
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 5694 atcacattggtacttgccaggtttcgaacccgcgccctc 5732
|||||||||||||||||||||||||||||||||||||||
Sbjct: 632 atcacattggtacttgccaggtttcgaacccgcgccctc 670
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 60,594
Number of extensions: 6972
Number of successful extensions: 6972
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 6970
Number of HSP's successfully gapped: 9
Length of query: 6101
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6083
Effective length of database: 8,109,745
Effective search space: 49331578835
Effective search space used: 49331578835
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)