BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05696 (UTR included)
(2932 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B1F10 930 0.0
BF01032A1A04 500 e-141
>BF01055B1F10
Length = 836
Score = 930 bits (469), Expect = 0.0
Identities = 495/504 (98%), Gaps = 6/504 (1%)
Strand = Plus / Plus
Query: 1836 atttcatcaaactttgatatggaccaggccggcatgaaacagcagttgttgaatctgcag 1895
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 atttcatcaaactttgatatggaccaggccggcatgaaacagcagttgttgaatcttcag 60
Query: 1896 cagctaatggctttcataactccggatttagccaaacacctggccagcaaagactccggg 1955
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 61 cagctaatggctttcataactccggatttagccaagcacctcgccagcaaagactccggg 120
Query: 1956 aacatgtacttctgcttcagatggctcctggtgtggttcaagagggaattctctcataga 2015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacatgtacttctgcttcagatggctcctggtgtggttcaagagggaattctctcataga 180
Query: 2016 gatatcatgaggttatgggaggtactgtggacggggttgccatgcgccaacttccatttg 2075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatatcatgaggttatgggaggtactgtggacggggttgccatgcgccaacttccatttg 240
Query: 2076 ctgatatgtgttgccattcttgacgctgaaaaggatgttcttattagcaaggattacgga 2135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgatatgtgttgccattcttgacgctgaaaaggatgttcttattagcaaggattacgga 300
Query: 2136 tttactgaggtcttgaagcatgtcaacgacctgtcaatgtgcctcgatgtggatatcata 2195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttactgaggtcttgaagcatgtcaacgacctgtcaatgtgcctcgatgtggatatcata 360
Query: 2196 ctaagcacagcggagggtatttaccatcagatagtctcgtccccacatctatcagatcag 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctaagcacagcggagggtatttaccatcagatagtctcgtccccacatctatcagatcag 420
Query: 2256 atcaggctgattttaggccttccattggccccgaaacctgaagtaccagaa------ccc 2309
||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 421 atcaggctgattttaggccttccattggccccgaaacctgaagtaccagaacccgagccc 480
Query: 2310 gagcccactacattcagcaatggt 2333
||||||||||||||||||||||||
Sbjct: 481 gagcccactacattcagcaatggt 504
Score = 357 bits (180), Expect = 6e-98
Identities = 189/192 (98%)
Strand = Plus / Plus
Query: 2358 cttagaatattttttgtattaaatatgtatgtgtccttcgaatgctgtactaatgttgcc 2417
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 645 cttagaatattttttgtattaaatatgtatgtgtccttcgattgctgtactaatgttgcc 704
Query: 2418 attttaaattattaaatttgcccgttttattatatatgacacttgaattatgagttattt 2477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 attttaaattattaaatttgcccgttttattatatatgacacttgaattatgagttattt 764
Query: 2478 cccaattgttattaacaatgaactcctaaatttatttagagctcttgcgattttttaaaa 2537
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 765 ctcaattgttattaacaatgaactcctaaatttatttagacctcttgcgattttttaaaa 824
Query: 2538 tatcatcacgta 2549
||||||||||||
Sbjct: 825 tatcatcacgta 836
>BF01032A1A04
Length = 702
Score = 500 bits (252), Expect = e-141
Identities = 281/291 (96%), Gaps = 6/291 (2%)
Strand = Plus / Plus
Query: 2073 ttgctgatatgtgttgccattcttgacgctgaaaaggatgttcttattagcaaggattac 2132
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 1 ttgctgatatgtgttgccattcttgacgctgacaatgatgttcttattagcaaggattac 60
Query: 2133 ggatttactgaggtcttgaagcatgtcaacgacctgtcaatgtgcctcgatgtggatatc 2192
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 ggatttactgaggtcttgaagcatgtcaacgacctgtcgatgtgcctcgatgtggatatc 120
Query: 2193 atactaagcacagcggagggtatttaccatcagatagtctcgtccccacatctatcagat 2252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atactaagcacagcggagggtatttaccatcagatagtctcgtccccacatctatcagat 180
Query: 2253 cagatcaggctgattttaggccttccattggccccgaaacctgaagtaccagaa------ 2306
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagatcaggctgattttaggccttccattggccccgaaacctgaagtaccagaacccgag 240
Query: 2307 cccgagcccactacattcagcaatggtaatgacagaggagaaactgaggaa 2357
||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 cccgagcccactacattcagcaatggtaatgacagcggagaaactgaggaa 291
Score = 468 bits (236), Expect = e-131
Identities = 266/277 (96%), Gaps = 8/277 (2%)
Strand = Plus / Plus
Query: 2358 cttagaatattttttgtattaaatatgtatgtgtccttcgaatgctgtactaatgttgcc 2417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cttagaatattttttgtattaaatatgtatgtgtccttcgaatgctgtactaatgttgcc 493
Query: 2418 attttaaattattaaatttgcccgttttattatatatgacacttgaattatgagttattt 2477
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 attttaa--------atttgcccgttttattatatatgacacttgaattatgagttattt 545
Query: 2478 cccaattgttattaacaatgaactcctaaatttatttagagctcttgcgattttttaaaa 2537
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ctcaattgttattaacaatgaactcctaaatttatttagagctcttgcgattttttaaaa 605
Query: 2538 tatcatcacgtattgtcaatactatcaccaaatatttatatggcaacactttaaactatt 2597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tatcatcacgtattgtcaatactatcaccaaatatttatatggcaacactttaaactatt 665
Query: 2598 ttaaaaattatctttagcattttatccttatataact 2634
||||||||||||||| ||||||||| |||||||||||
Sbjct: 666 ttaaaaattatctttggcattttattcttatataact 702
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 351,488
Number of extensions: 8067
Number of successful extensions: 8067
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8067
Number of HSP's successfully gapped: 6
Length of query: 2932
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2914
Effective length of database: 8,109,745
Effective search space: 23631796930
Effective search space used: 23631796930
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)