BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05704 (UTR included)
(1861 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2800_C1 1407 0.0
>BF14_2800_C1
Length = 789
Score = 1407 bits (710), Expect = 0.0
Identities = 769/789 (97%), Gaps = 7/789 (0%)
Strand = Plus / Plus
Query: 321 gtcgtgtatataatcagattttgtttataattaaaatattcactattcacacatttcgtt 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2 gtcgtgtatataatcagattttgtttataattaaaatattcactattcacacatttcctt 61
Query: 381 actttgtgttaaagtttttaatgaattatctatcttcgttcagtgtttaagtcaaacaat 440
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 62 actttgtgttaaagtttttaatgaattatctatcatcgttcagtgtttaagtcaaacaat 121
Query: 441 atttctgaacatttttaaagaaagggatgatttattaataaataattccaaacgagaatc 500
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 122 atttctgaacatttaaaaagaaagggatgatttattaataaataattcaaaacgagaacc 181
Query: 501 atggctggtcaagggcatcagtttcctggaaatttccagggcaatgctggagctatgagg 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atggctggtcaagggcatcagtttcctggaaatttccagggcaatgctggagctatgagg 241
Query: 561 acaggtttcggcggaggacccatgggcaaccaaatgcaggctatgcccaaccaattaact 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acaggtttcggcggaggacccatgggcaaccaaatgcaggctatgcccaaccaattaact 301
Query: 621 ggtgtgatgggtgggccaatgggtaatgcaggtatggttggtatgggtaatcagatggtc 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggtgtgatgggtgggccaatgggtaatgcaggtatggttggtatgggtaatcagatggtc 361
Query: 681 ccgccctatggagcagcaatgccaggacagatgggaaatatgagtatggggaatcaaggt 740
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccgccatatggagcagcaatgccaggacagatgggaaatatgagtatggggaatcaaggt 421
Query: 741 atgggggttggagtaggcactggcccagcaggtcttggacctcaagcggtacaacaagc- 799
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 422 atgggggttggagtaggcactgggccagcaggtcttggacctcaagcggtacaacaagca 481
Query: 800 -----aggtatgcaagtagccgccgtacaagctgctgcacctcctcctgctccggtgaat 854
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ggtagaggtatgcaagtagccgccgtacaagctgctgcacctcctcctgctccggtgaat 541
Query: 855 caccctccacagaacaaagagttcaatacagcctccttatgcaaattcggtcaagaaact 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 caccctccacagaacaaagagttcaatacagcctccttatgcaaattcggtcaagaaact 601
Query: 915 gttcaagatatagtaagcaggacacaagatgtgttccaaactctgaaagctatacaacca 974
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 602 gttcaagatatagtaagcaggacacaagatgtgttccaaaccctgaaagctatacaacca 661
Query: 975 cctaacggaacacaacacggtgagaatgctagcaatgataagaaagcaaagatgcaggaa 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cctaacggaacacaacacggtgagaatgctagcaatgataagaaagcaaagatgcaggaa 721
Query: 1035 caattgaggacgattaggcttctgttcaaacggctgaggctcatatatgaaaagtgtaac 1094
||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||
Sbjct: 722 caattgaggacgattaggcttctgtnc-aacggctgnnnctcatatatgaaaagtgtaac 780
Query: 1095 gagacatgt 1103
|||||||||
Sbjct: 781 gagacatgt 789
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 341,252
Number of extensions: 22049
Number of successful extensions: 22049
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22048
Number of HSP's successfully gapped: 2
Length of query: 1861
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1844
Effective length of database: 8,119,229
Effective search space: 14971858276
Effective search space used: 14971858276
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)