BLASTN 2.2.24 [Aug-08-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DPGLEAN05714 (UTR included) (1303 letters) Database: est 9484 sequences; 8,280,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BF01052B1H02 105 2e-22 BF01029B2F12 90 1e-17 BF01023A2A12 90 1e-17 BF01056B1D02 70 1e-11
>BF01052B1H02 Length = 790 Score = 105 bits (53), Expect = 2e-22 Identities = 65/69 (94%) Strand = Plus / Plus Query: 15 caaattataagaccaggtttcctcacgatattttccttcaccatgcgtcagtggtgtcta 74 ||||||||||||||||||||||||||||| |||||||||||| | ||||||| ||||||| Sbjct: 388 caaattataagaccaggtttcctcacgatgttttccttcaccgtccgtcagtagtgtcta 447 Query: 75 aatactctt 83 ||||||||| Sbjct: 448 aatactctt 456 >BF01029B2F12 Length = 749 Score = 89.7 bits (45), Expect = 1e-17 Identities = 60/65 (92%) Strand = Plus / Plus Query: 19 ttataagaccaggtttcctcacgatattttccttcaccatgcgtcagtggtgtctaaata 78 |||||||||||||||||||| |||| | |||||||||| | ||||||||||||||||||| Sbjct: 543 ttataagaccaggtttcctcgcgatgtcttccttcaccgtccgtcagtggtgtctaaata 602 Query: 79 ctctt 83 ||||| Sbjct: 603 ctctt 607 >BF01023A2A12 Length = 723 Score = 89.7 bits (45), Expect = 1e-17 Identities = 60/65 (92%) Strand = Plus / Minus Query: 16 aaattataagaccaggtttcctcacgatattttccttcaccatgcgtcagtggtgtctaa 75 ||||||||||||||||||||||||||| || ||||||||| | |||||||||||||||| Sbjct: 222 aaattataagaccaggtttcctcacgacgttctccttcaccgtccgtcagtggtgtctaa 163 Query: 76 atact 80 ||||| Sbjct: 162 atact 158 >BF01056B1D02 Length = 778 Score = 69.9 bits (35), Expect = 1e-11 Identities = 54/60 (90%), Gaps = 4/60 (6%) Strand = Plus / Minus Query: 16 aaattataagaccaggtttcctcacgatattttccttcaccatgcgtcagtggtgtctaa 75 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 623 aaattataagaccaggtttcctcacgacgttttccttcac----cgtcagtggtgtctaa 568 Database: est Posted date: Jul 14, 2011 2:25 PM Number of letters in database: 8,280,457 Number of sequences in database: 9484 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 9484 Number of Hits to DB: 245,562 Number of extensions: 6017 Number of successful extensions: 6017 Number of sequences better than 1.0e-10: 4 Number of HSP's gapped: 6016 Number of HSP's successfully gapped: 4 Length of query: 1303 Length of database: 8,280,457 Length adjustment: 17 Effective length of query: 1286 Effective length of database: 8,119,229 Effective search space: 10441328494 Effective search space used: 10441328494 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 50 (99.1 bits) S1: 12 (24.3 bits) S2: 34 (67.9 bits)