BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05732 (UTR included)
(2848 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A2F06 971 0.0
>BF01041A2F06
Length = 795
Score = 971 bits (490), Expect = 0.0
Identities = 490/490 (100%)
Strand = Plus / Minus
Query: 2199 gcggatgaggtgagcgtgctatcgtacaccgaggactcgaactcgtctaacatgtatgaa 2258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcggatgaggtgagcgtgctatcgtacaccgaggactcgaactcgtctaacatgtatgaa 442
Query: 2259 gtgaacgtacagaacggcgcgcatcaagaacagaagacgagcgagaaggtcgacaggggg 2318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgaacgtacagaacggcgcgcatcaagaacagaagacgagcgagaaggtcgacaggggg 382
Query: 2319 tccagctcgagcggcatagcgtgcacgtagcactacgaggagtggcggcgccggttcata 2378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccagctcgagcggcatagcgtgcacgtagcactacgaggagtggcggcgccggttcata 322
Query: 2379 tacggacccaccggccacaaacacaggcgactgtgaactgacagtgacagtgacgggtga 2438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacggacccaccggccacaaacacaggcgactgtgaactgacagtgacagtgacgggtga 262
Query: 2439 caggtgacaagtgctagtgataagtgtgacgtgcggatagtgatgtgacggccgatgtag 2498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggtgacaagtgctagtgataagtgtgacgtgcggatagtgatgtgacggccgatgtag 202
Query: 2499 gtaagtcgatagttggccgggtcacggaggtgcgtatggtttgtgttgttggttgcgaca 2558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtaagtcgatagttggccgggtcacggaggtgcgtatggtttgtgttgttggttgcgaca 142
Query: 2559 cgtgtatcgatactcgttgatgttgtctcgtttcaggtcggccctcgacggcggacacgt 2618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cgtgtatcgatactcgttgatgttgtctcgtttcaggtcggccctcgacggcggacacgt 82
Query: 2619 gagtcggttcgaacgatagttaggttgtagtggcgttcgcgaggaaactatttagacttc 2678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gagtcggttcgaacgatagttaggttgtagtggcgttcgcgaggaaactatttagacttc 22
Query: 2679 ggacgcagct 2688
||||||||||
Sbjct: 21 ggacgcagct 12
Score = 73.8 bits (37), Expect = 1e-12
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 2163 catacaaagaaggctaagagggtatcggaaagcagtg 2199
|||||||||||||||||||||||||||||||||||||
Sbjct: 795 catacaaagaaggctaagagggtatcggaaagcagtg 759
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 299,876
Number of extensions: 6235
Number of successful extensions: 6235
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6235
Number of HSP's successfully gapped: 2
Length of query: 2848
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2831
Effective length of database: 8,119,229
Effective search space: 22985537299
Effective search space used: 22985537299
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)