BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05734 (UTR included)
(1759 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034A1A05 1548 0.0
>BF01034A1A05
Length = 789
Score = 1548 bits (781), Expect = 0.0
Identities = 787/789 (99%)
Strand = Plus / Plus
Query: 424 caggtatcatatcaaatcggttttgctcgagtatcgcgaaaaatttcatacaatcgcgtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggtatcatatcaaatcggttttgctcgagtatcgcgaaaaatttcatacaatcgcgtt 60
Query: 484 ttttttctattataaagatgagttcggcatcacaatggaaagaagaaaaagaaagaattc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttttctattataaagatgagttcggcatcacaatggaaagaagaaaaagaaagaattc 120
Query: 544 ttgctttacctacagaagaaaaaagaaagttatataaatctggtgactacattacgatag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgctttacctacagaagaaaaaagaaagttatataaatctggtgactacattacgatag 180
Query: 604 acaaagttgacccctggatattttatgttcaagataaccaaagtttacaggataagaaac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaaagttgacccctggatattttatgttcaagataaccaaagtttacaggataagaaac 240
Query: 664 atacagttgaagaccttaacgaattccgtaaaataaaacttaattcagaacgaaatataa 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atacagttgaagaccttaacgaattccgtaaaataaaacttaattcagaacgaaatataa 300
Query: 724 acattaaccataaagtttcgattttcaagggtgatataacgaaattggaggtagatgcta 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acattaaccataaagtttcgattttcaagggtgatataacgaaattggaggtagatgcta 360
Query: 784 tagtaaatgctgcgaattcacgtctgattgctggaggcggcgttgacggggccattcacc 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 361 tagtaaatgctgcgaattcacgtctgattgctggaggcggcgttgacggggccatacacc 420
Query: 844 gtgctgctggaccaatgcttcaggctgaatgtaatactttgggtggctgtcctactggtg 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgctgctggaccaatgcttcaggctgaatgtaatactttgggtggctgtcctactggtg 480
Query: 904 aagccagaattacttgcggttataacttacctgccaattatgttatccatacagttggtc 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagccagaattacttgcggttataacttacctgccaattatgttatccatacagttggtc 540
Query: 964 cacagaatggctctgcaccaaatctaaaatcatgttatgagaattgttttgcacttgtaa 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cacagaatggctctgcaccaaatctaaaatcatgttatgagaattgttttgcacttgtaa 600
Query: 1024 agcagtatgaattaaagactatcgctttcccgtgtatatccactggtatttacggcttcc 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agcagtatgaattaaagactatcgctttcccgtgtatatccactggtatttacggcttcc 660
Query: 1084 ctaacagacttgcggctcacatagcattaagaagtgctcggaaatttctagaagacaaca 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctaacagacttgcggctcacatagcattaagaagtgctcggaaatttctagaagacaaca 720
Query: 1144 aggatgtcagcagagtcatattctgcacattcatgccagtagatgtcgatatatatgaga 1203
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 721 aggatgtcagcagagtcatattctgcacattcatgccagtagatgtcgatatatatgaaa 780
Query: 1204 ccttgatgc 1212
|||||||||
Sbjct: 781 ccttgatgc 789
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 295,312
Number of extensions: 7069
Number of successful extensions: 7069
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7069
Number of HSP's successfully gapped: 1
Length of query: 1759
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1742
Effective length of database: 8,119,229
Effective search space: 14143696918
Effective search space used: 14143696918
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)