BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05738 (UTR included)
(2683 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A2E10 1247 0.0
>BF01051A2E10
Length = 721
Score = 1247 bits (629), Expect = 0.0
Identities = 659/669 (98%)
Strand = Plus / Plus
Query: 493 aggataaaatggcaaaggcagtcaatttacaaaatcttgtaaaacatattgttaacggta 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 aggataaaatggcaaaggcagtcaatttacaaaatcttgtaaaacatattgttaacggta 112
Query: 553 cgctggcggaaaatctttgtcgtatatgtttattgccattaaatgatctctatgaggata 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 cgctggcggaaaatctttgtcgtatatgtttattgccattaaatgatctctatgaggata 172
Query: 613 ttttcacaaatatttgtaaagaaaacaacgaatactgtgtggctgatgtattaaacacgg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ttttcacaaatatttgtaaagaaaacaacgaatactgtgtggctgatgtattaaacacgg 232
Query: 673 tctgtcaaataaagatttcgcatgtggacaactacagagtatgtgcaaattgttttatta 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tctgtcaaataaagatttcgcatgtggacaactacagagtatgtgcaaattgttttatta 292
Query: 733 gtgcctctgaggcttacaaattttaccttctcactcaaagaagtaatcagattctagagt 792
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gtgcctctgaggcttacagattttaccttctcactcaaagaagtaatcagattctagagt 352
Query: 793 tctatgttaacgaattggaaaatcacgttaattcaatagactacccggagaatatgtctg 852
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 353 tctatgtaaacgaattggaaaatcacgttaattcaatagattacccggagaatatgtctg 412
Query: 853 tggactctctatgcataccattgccagtcataacagttgatacggattacgattttgata 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tggactctctatgcataccattgccagtcataacagttgatacggattacgattttgata 472
Query: 913 ttagtaaatttccatttaaaagtgttcttcacgaaaagcctatagttaacggaggaaatg 972
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 473 taagtaaatttccatttaaaagtgttcttcacgaaaagcctatagttaacggagaaaatg 532
Query: 973 gtacaactgatggtggtgtagattgtgtcaaatcagaagatatagatgaagggaacatag 1032
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||
Sbjct: 533 gtacaactgatggtggtgtagattgtgttaaatcagaagacatcgatgaagggaacatag 592
Query: 1033 ttattgtgatggatgatggggtgccgacattttttaagccgcaaagagatggatcattac 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttattgtgatggatgatggggtgccgacattttttaagccgcaaagagatggatcattac 652
Query: 1093 tcacactggacggagaaaaagatctgagtatagacttcgataatgagccggaacggaaga 1152
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 653 tcactctggacggagaaaaagatctgagtatagacttcgataatgagccggaacgaaaga 712
Query: 1153 tgatgaaga 1161
|||||||||
Sbjct: 713 tgatgaaga 721
Score = 109 bits (55), Expect = 2e-23
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 348 tgaaccgcaaaatcgtgtttcaagaacgcatcagtagtatattctacttcagagg 402
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaaccgcaaaatcgtgtttcaagaacgcatcagtagtatattctacttcagagg 55
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 335,487
Number of extensions: 6941
Number of successful extensions: 6941
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6941
Number of HSP's successfully gapped: 2
Length of query: 2683
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2666
Effective length of database: 8,119,229
Effective search space: 21645864514
Effective search space used: 21645864514
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)