BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05739 (UTR included)
(2953 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021A2C12 1626 0.0
>BF01021A2C12
Length = 849
Score = 1626 bits (820), Expect = 0.0
Identities = 841/849 (99%)
Strand = Plus / Plus
Query: 1786 ctgacgagttcgaggcggaggagatactcacgtacgaggaggtggctctgtactacccgc 1845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgacgagttcgaggcggaggagatactcacgtacgaggaggtggctctgtactacccgc 60
Query: 1846 gcgcctcccacaagcgacccatcgtcctcatcgggccccccaacatcggtcgccacgagc 1905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgcctcccacaagcgacccatcgtcctcatcgggccccccaacatcggtcgccacgagc 120
Query: 1906 tcaggcagagactcatggaagactccacgaggttcgctgcagccgttccgcacacatccc 1965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaggcagagactcatggaagactccacgaggttcgctgcagccgttccgcacacatccc 180
Query: 1966 gcgcccgcaaggaccacgaggcggccggccaggactatcacttcatatcccgcgctcagt 2025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcgcccgcaaggaccacgaggcggccggccaggactatcacttcatatcccgcgctcagt 240
Query: 2026 tcgaggcggacatcctgaacaggaagtttgtggagcacggagaatacgagaaggcttatt 2085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgaggcggacatcctgaacaggaagtttgtggagcacggagaatacgagaaggcttatt 300
Query: 2086 atggtacatccgtcgaggcgatccgcgaagtggtgaactccggtaagatctgtgtcctga 2145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atggtacatccgtcgaggcgatccgcgaagtggtgaactccggtaagatctgtgtcctga 360
Query: 2146 accttcaccctcagtcgctgcgaatcctgcgaggctccgacctcaagccctacaccgtgt 2205
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 361 accttcaccctcagtcgctgcgcatcctgcggggctccgacctcaagccctacaccgtgt 420
Query: 2206 tcgtggcgccgcccagcctggagaagctgcggcagaagaagatcaggaatggagaggcct 2265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgtggcgccgcccagcctggagaagctgcggcagaagaagatcaggaatggagaggcct 480
Query: 2266 ttaaggaggaggaactaaaagagataatagcgaccgcgagggacatggaactccgctggg 2325
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 481 ttaaggaggaggaactaaaagagataatagcgaccgcgagggacatggaactgcgctggg 540
Query: 2326 gtcacttgttcgacatgatcattattaacaacgacacgcagcgcgcttaccagcaactgt 2385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcacttgttcgacatgatcattattaacaacgacacgcagcgcgcttaccagcaactgt 600
Query: 2386 tgaacgagatcaacagtctggagagggaaccgcaatgggtcccagcgcactggctcaaac 2445
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 601 tgaacgagatcaacagtctggagagggaaccgcaatgggtccccgcgcactggctcaaac 660
Query: 2446 agacctagcgcaggattcccgccatcacggataacataatgccaatgttacatttgctag 2505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agacctagcgcaggattcccgccatcacggataacataatgccaatgttacatttgctag 720
Query: 2506 ttcacgtatccgaacgtgactcgttcgacgacgcaaatggttttacatttgctctcggtc 2565
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 721 ttcacgtatccgaacgtgactcgttcgacgacgcnnntggttttacatttgctctcggtc 780
Query: 2566 cgcgtttccgaacgtacagagacgcgcgctattacagttcgaatacattccgaacggaat 2625
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 781 cgcgtttccgaacgtacagagacgcgcgctgttacagttcgaatacattccgaacggaat 840
Query: 2626 gtgtcatcg 2634
|||||||||
Sbjct: 841 gtgtcatcg 849
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 306,833
Number of extensions: 5948
Number of successful extensions: 5948
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5946
Number of HSP's successfully gapped: 1
Length of query: 2953
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2935
Effective length of database: 8,109,745
Effective search space: 23802101575
Effective search space used: 23802101575
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)