BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05740 (UTR included)
(1465 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1695_C1 82 3e-15
BF14_1645_C1 82 3e-15
BF14_3240_C1 78 4e-14
BF14_2430_C1 76 2e-13
BF01025B1E11 68 4e-11
>BF14_1695_C1
Length = 1407
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 203 tataatatggccttcaaccatgcaaagacgtgtacagtatattctgccagtgtcgtttag 262
||||||||||| |||| || |||||||||||| ||||||||||||||||||||| | |||
Sbjct: 1241 tataatatggcattcatccgtgcaaagacgtgcacagtatattctgccagtgtcatgtag 1182
Query: 263 aatggtggacaca 275
|||| |||||||
Sbjct: 1181 aatgaaggacaca 1169
>BF14_1645_C1
Length = 793
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 203 tataatatggccttcaaccatgcaaagacgtgtacagtatattctgccagtgtcgtttag 262
|||| ||||||||||| || ||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 184 tatattatggccttcacccgtgccaagacgtgcacagtatattctgccagtgtcgtgtag 125
Query: 263 aatgg 267
|||||
Sbjct: 124 aatgg 120
>BF14_3240_C1
Length = 2110
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 193 tttttttaaatataatatggccttcaaccatgcaaagacgtgtacagtatattctgccag 252
||||||| |||||||||||||||||| || |||| ||| ||| ||||||||||| |||||
Sbjct: 1686 ttttttttaatataatatggccttcatccgtgcagagaagtgcacagtatattccgccag 1627
Query: 253 tgtcgtttagaatgg 267
|| ||| ||||||||
Sbjct: 1626 tgccgtgtagaatgg 1612
>BF14_2430_C1
Length = 830
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 206 aatatggccttcaaccatgcaaagacgtgtacagtatattctgccagtgtcgtttagaat 265
||||||||||||| | |||||||| ||| ||||||||||||||||||||||| ||||||
Sbjct: 231 aatatggccttcatacgtgcaaagatgtgcacagtatattctgccagtgtcgtgtagaat 172
Query: 266 gg 267
||
Sbjct: 171 gg 170
>BF01025B1E11
Length = 786
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 206 aatatggccttcaaccatgcaaagacgtgtacagtatattctgccagtgtcgtttagaat 265
||||||||||||| || ||||| |||||| ||| |||||||||||||| |||| ||||||
Sbjct: 267 aatatggccttcatccgtgcaaggacgtgcacaatatattctgccagtatcgtgtagaat 208
Query: 266 gg 267
||
Sbjct: 207 gg 206
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 222,580
Number of extensions: 5372
Number of successful extensions: 5372
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 5372
Number of HSP's successfully gapped: 5
Length of query: 1465
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1448
Effective length of database: 8,119,229
Effective search space: 11756643592
Effective search space used: 11756643592
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)