BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN05743 (UTR included)
         (2353 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01051A1E05                                                          494   e-139

>BF01051A1E05
          Length = 320

 Score =   bits (249), Expect = e-139
 Identities = 255/257 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2091 tttttttgtttgtttactcatttctaacgataaaattggtcactacaaaatattccatag 2150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315  tttttttgtttgtttactcatttctaacgataaaattggtcactacaaaatattccatag 256

                                                                        
Query: 2151 cgcgatcgattcacagacccttgatatattatgcaggctgttcacatcaccgctgagatg 2210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255  cgcgatcgattcacagacccttgatatattatgcaggctgttcacatcaccgctgagatg 196

                                                                        
Query: 2211 atatatccgtttgtttgttgatatctattgatagtcaacaaaaaaaaacattacattata 2270
            ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 195  atatatccgtttgtttgttgatatccattgatagtcaacaacaaaaaacattacattata 136

                                                                        
Query: 2271 ataaaaaaaataaccattaacacatgtctgcaacaatacattacacgtcgttgttacatt 2330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135  ataaaaaaaataaccattaacacatgtctgcaacaatacattacacgtcgttgttacatt 76

                             
Query: 2331 ggacataactccgacca 2347
            |||||||||||||||||
Sbjct: 75   ggacataactccgacca 59


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 302,732
Number of extensions: 8334
Number of successful extensions: 8334
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8334
Number of HSP's successfully gapped: 1
Length of query: 2353
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2336
Effective length of database: 8,119,229
Effective search space: 18966518944
Effective search space used: 18966518944
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)