BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05768 (UTR included)
(1675 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A2D04 581 e-165
>BF01056A2D04
Length = 871
Score = 581 bits (293), Expect = e-165
Identities = 320/329 (97%), Gaps = 2/329 (0%)
Strand = Plus / Plus
Query: 1194 ggtatttgaaaaatcacatgataagccacacaaaggagaagaaatatgcctgtaagtact 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ggtatttgaaaaatcacatgataagccacacaaaggagaagaaatatgcctgtaagtact 602
Query: 1254 gcggagtgcgcttcgggcgttcggaccattgtttgaggcatcagaggaccgctcatgaga 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gcggagtgcgcttcgggcgttcggaccattgtttgaggcatcagaggaccgctcatgaga 662
Query: 1314 aactcattacaaatacagcctgacaaacaaaaacagactatatatgcatagtaccaaggt 1373
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 663 aactcattacaaatacagcctgacaaacaaaaacagactatatatgtatagtaccaaggt 722
Query: 1374 ctagattaatgtgataagttttagatgataaa--ttgttaaggtgaagggaatggcttga 1431
||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||
Sbjct: 723 ctagattaatgtgataaattttnnntgataaattttgttaaggtgaagggaatggcttga 782
Query: 1432 aattattgtaaagccaataggacattttatttccgtttatgtctgatgttttagaattaa 1491
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 783 aattattgtaaagccaataggacattttatttccgtttatgtctgaagttttaggattaa 842
Query: 1492 tgttttatgaaacattttatattgttgct 1520
|||||||||||||||||||||||||||||
Sbjct: 843 tgttttatgaaacattttatattgttgct 871
Score = 567 bits (286), Expect = e-161
Identities = 295/298 (98%)
Strand = Plus / Plus
Query: 793 tgtgcgagaaaatgttctcgagttgcagtgccaggtacaaacattataaaacaaaacact 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tgtgcgagaaaatgttctcgagttgcagtgccaggtacaaacattataaaacaaaacact 71
Query: 853 tgggcatcaaacaacactgtaacgaatgtaataaagatgtagtaagtctctcagcacaca 912
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 72 tgggcatcaaacaacactgtaacgaatgtaataaagatgtagtgagtctctcagcacaca 131
Query: 913 gaatggtaattcacaatacagaatcactaccatacgaatgtgtatcctgcggtcggaggt 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gaatggtaattcacaatacagaatcactaccatacgaatgtgtatcctgcggtcggaggt 191
Query: 973 tcatatcccggtcgttgagagatcatcacatgttgacacacactaaaaatagaccgcatc 1032
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 192 tcatatcccggtcgttgagagatcatcatatgttgacacacactaaaaatagaccgcatc 251
Query: 1033 cctgtgatcagtgcgagaagacatttaaaagtaattataccttgatgcagcacagaag 1090
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 252 cctgtgatcagtgcgagaagacatttaaaagtaattatacattgatgcagcacagaag 309
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 1086 agaagtcattcaaaagaaaagccatatgagtgtccggactgtggtaaattcttctct 1142
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 395 agaagtcattcaaaagaaaagccctatgaatgtccggactgtggtaaattcttctct 451
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 247,091
Number of extensions: 5550
Number of successful extensions: 5550
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5549
Number of HSP's successfully gapped: 3
Length of query: 1675
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1658
Effective length of database: 8,119,229
Effective search space: 13461681682
Effective search space used: 13461681682
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)