BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05772 (UTR included)
(4039 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A2D04 563 e-160
>BF01056A2D04
Length = 871
Score = 563 bits (284), Expect = e-160
Identities = 311/320 (97%), Gaps = 2/320 (0%)
Strand = Plus / Minus
Query: 3722 agcaacaatataaaatgtttcataaaacattaattctaaaacatcagacataaacggaaa 3781
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 871 agcaacaatataaaatgtttcataaaacattaatcctaaaacttcagacataaacggaaa 812
Query: 3782 taaaatgtcctattggctttacaataatttcaagccattcccttcaccttaacaa--ttt 3839
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 811 taaaatgtcctattggctttacaataatttcaagccattcccttcaccttaacaaaattt 752
Query: 3840 atcatctaaaacttatcacattaatctagaccttggtactatgcatatatagtctgtttt 3899
|||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 751 atcannnaaaatttatcacattaatctagaccttggtactatacatatatagtctgtttt 692
Query: 3900 tgtttgtcaggctgtatttgtaatgagtttctcatgagcggtcctctgatgcctcaaaca 3959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tgtttgtcaggctgtatttgtaatgagtttctcatgagcggtcctctgatgcctcaaaca 632
Query: 3960 atggtccgaacgcccgaagcgcactccgcagtacttacaggcatatttcttctcctttgt 4019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 atggtccgaacgcccgaagcgcactccgcagtacttacaggcatatttcttctcctttgt 572
Query: 4020 gtggcttatcatgtgatttt 4039
||||||||||||||||||||
Sbjct: 571 gtggcttatcatgtgatttt 552
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 479,351
Number of extensions: 22586
Number of successful extensions: 22586
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22585
Number of HSP's successfully gapped: 1
Length of query: 4039
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4021
Effective length of database: 8,109,745
Effective search space: 32609284645
Effective search space used: 32609284645
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)