BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05783 (UTR included)
(1522 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045B1A04 944 0.0
>BF01045B1A04
Length = 809
Score = 944 bits (476), Expect = 0.0
Identities = 510/520 (98%), Gaps = 6/520 (1%)
Strand = Plus / Plus
Query: 421 gcaacgtgaaatttaaattaattacaaaatacactttgtgatttaggttaaataagaagt 480
|||||| || |||||||| |||||||||||||||| ||||||||||| |||||||||||
Sbjct: 1 gcaacgcgatatttaaatcaattacaaaatacact--gtgatttaggtaaaataagaagt 58
Query: 481 gtaattaataagaattaattatgacaacaatacgtccttttacatgtgaagacatgctat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 gtaattaataagaattaattatgacaacaatacgtccttttacatgtgaagacatgctat 118
Query: 541 actttaacaacgt----aaatttggatccgttgacagagacctatggtttgtctttttat 596
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 actttaacaacgtgtcgaaatttggatccgttgacagagacctatggtttgtctttttat 178
Query: 597 acacaatatttagcgcactggccggagtactttcaggttgccgaatctccgagtggagaa 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 acacaatatttagcgcactggccggagtactttcaggttgccgaatctccgagtggagaa 238
Query: 657 attatgggatacattatgggaaaagcagagggtcatggtgaaaattggcatggccatgtt 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 attatgggatacattatgggaaaagcagagggtcatggtgaaaattggcatggccatgtt 298
Query: 717 acagcattaactgttagcccagactacaggcgtttgggtctggctgcaaccttaatgaac 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 acagcattaactgttagcccagactacaggcgtttgggtctggctgcaaccttaatgaac 358
Query: 777 attttggaagaagtgtccgaaaagaaaaaggcatactttgttgacttatttgtgagagtt 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 attttggaagaagtgtccgaaaagaaaaaggcatactttgttgacttatttgtgagagtt 418
Query: 837 agcaataaagtggcaattaatatgtataaaaatcttggatatattgtgtataggactgtt 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 agcaataaagtggcaattaatatgtataaaaatcttggatatattgtgtataggactgtt 478
Query: 897 ttagaatattactcaggagatcccgatgaagatgcttatg 936
||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttagaatattactcaggagatcccgatgaagatgcttatg 518
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,608
Number of extensions: 6831
Number of successful extensions: 6831
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6829
Number of HSP's successfully gapped: 1
Length of query: 1522
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1505
Effective length of database: 8,119,229
Effective search space: 12219439645
Effective search space used: 12219439645
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)