BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05795 (UTR included)
(2122 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2486_C1 1162 0.0
>BF14_2486_C1
Length = 1084
Score = 1162 bits (586), Expect = 0.0
Identities = 604/610 (99%)
Strand = Plus / Plus
Query: 325 acttcatgccgccctcggacgatactcacttcctggatgaagagattcctctcaaactgg 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttcatgccgccctcggacgatactcacttcctggatgaagagattcctctcaaactgg 60
Query: 385 agacggaagatgatgtgccactacaggagatacgagaaaataaattgaaagacctggcac 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agacggaagatgatgtgccactacaggagatacgagaaaataaattgaaagacctggcac 120
Query: 445 tagacggcttcatgacagaatctaatcaagagaagaaagaaaagactaagaaaacgaaaa 504
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 121 tagacggcttcatgacagaatctaatcaagagaagaaagagaagactaagaaaacgaaaa 180
Query: 505 agaaagttaagacaagagtcacagataacataaagacagagaatgagctggagagcgaca 564
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaaagttaagacaagagtcacggataacataaagacagagaatgagctggagagcgaca 240
Query: 565 cacaagaggctaaaacaccaaagaaaagaaaccttcgcagaactatagacatagacgaga 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacaagaggctaaaacaccaaagaaaagaaaccttcgcagaactatagacatagacgaga 300
Query: 625 acaagatacgagtcatcacactggacccggctgaacagctgaggcagagacaggcagaga 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 301 acaagatacgagtcatcacactggacccggctgaacagctgaggcagagacaggctgaga 360
Query: 685 acgaggccacactgaagttcccgttccaatgccacctgtgcttcaaaggtttcaactatg 744
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 361 acgaggccacactgaagttcccgttccaatgccacctctgcttcaaaggtttcaactatg 420
Query: 745 aagagaagctcaagaaccacatgttcaaacacagcccggctcgtggcagttacaagtgtg 804
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 aagagaagctcaagaaccacatgttcaaacacagcccggctcgtggcagttacaagtgcg 480
Query: 805 aagtgtgcagtatgtatctacccacaccgtactcggcatctgtccacggtctcactcaca 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagtgtgcagtatgtatctacccacaccgtactcggcatctgtccacggtctcactcaca 540
Query: 865 cactgaggtatgagtgtgtacagtgcgggagacggatgacagacaggctggctatagtta 924
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 541 cactgaggtatgagtgtgtacagtgcgggagacggatgacggacaggctggctatagtta 600
Query: 925 atcattacag 934
||||||||||
Sbjct: 601 atcattacag 610
Score = 599 bits (302), Expect = e-171
Identities = 314/318 (98%)
Strand = Plus / Plus
Query: 935 taatgataagactcaccgcggtcacatgaggaaccatcattctggctccagagccgtctg 994
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 671 taatgataagactcaccgcggtcacatgaggaaccatcactcgggctccagagccgtctg 730
Query: 995 cagggagtgcggcaagagcttcgtcaacaacgactccctcgccgagcacatgctcattca 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 cagggagtgcggcaagagcttcgtcaacaacgactccctcgccgagcacatgctcattca 790
Query: 1055 ccagggcatcaagaactacgagtgtccggagtgcggcaagaagttccgcacgaggaatca 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 791 ccagggcatcaagaactacgagtgtccggagtgcggcaagaagttccgcacgaggaacca 850
Query: 1115 gatcaggcaccacctggtcaaacacagcgaccacaaggagttctactgtgtggagtgtga 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gatcaggcaccacctggtcaaacacagcgaccacaaggagttctactgtgtggagtgtga 910
Query: 1175 cgtcaggttcaagtcagctcacaccctccgccaacacttgaaaaggacgacgaaacacaa 1234
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 911 cgtcaggttcaagtcagctcacaccctccgccaacacttgaagaggacgacgaaacacaa 970
Query: 1235 agacaagaagagcctcaa 1252
||||||||||||||||||
Sbjct: 971 agacaagaagagcctcaa 988
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 188,067
Number of extensions: 2896
Number of successful extensions: 2896
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2894
Number of HSP's successfully gapped: 2
Length of query: 2122
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2105
Effective length of database: 8,119,229
Effective search space: 17090977045
Effective search space used: 17090977045
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)