BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05797 (UTR included)
(1335 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1511_C1 1604 0.0
>BF14_1511_C1
Length = 1217
Score = 1604 bits (809), Expect = 0.0
Identities = 843/856 (98%)
Strand = Plus / Plus
Query: 337 ggtgacacggcatctatagacaagttcaaccgtcggttggtgaaggtgactcagcaacac 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ggtgacacggcatctatagacaagttcaaccgtcggttggtgaaggtgactcagcaacac 421
Query: 397 ggcgccgaagctcggcagttgttgaagcttatgggcatacccgtggtggaggctccgtgt 456
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 422 ggcgccgaagctcggcagttgttgaagcttatggggatacccgtggtggaggctccgtgt 481
Query: 457 gaagctgaggcacaatgcgctgaattagtcaaaggtggtaaggtgtatgctgtagccact 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gaagctgaggcacaatgcgctgaattagtcaaaggtggtaaggtgtatgctgtagccact 541
Query: 517 gaggatatggatgctttgaccttcggagcgaacgtgctgttgaggcacctcaccttctcc 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaggatatggatgctttgaccttcggagcgaacgtgctgttgaggcacctcaccttctcc 601
Query: 577 gaggcgaggaagatgccagtacaggagttccacctggaccaggtgctgagaggattggaa 636
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 602 gaggcgaggaagatgccagtacaggagttccacctggaccaagtgctgagaggattggaa 661
Query: 637 ttggaacagacagagttcattgacctctgcattctgttgggttgtgattactgcggctcc 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ttggaacagacagagttcattgacctctgcattctgttgggttgtgattactgcggctcc 721
Query: 697 atcaaagggatcggaccgaaacgggccatcgaactcatcaagcaacaccgcagtatagaa 756
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atcaaagggataggaccgaaacgggccatcgaactcatcaagcaacaccgcagtatagaa 781
Query: 757 caggtccttcacaatatcgacacaaagaagtacagtccgccggagaattgggaatacgag 816
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 caggtccttcacaatatcgacacaaagaagtacagtccgccggagaattgggaatacgaa 841
Query: 817 aacgctcggagactgttccagcaaccagaagttaccgaggcgaaggatgtcgagttaaaa 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 aacgctcggagactgttccagcaaccagaagttaccgaggcgaaggatgtcgagttaaaa 901
Query: 877 tggtcggatcctgacgaggaaggtctcgtgaagttcctctgtggagacaaacagttcaac 936
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 902 tggtcggatcctgacgaggaaggtctggtcaagttcctctgtggagacaaacagttcaac 961
Query: 937 gaggagcgcgtcagaaacggggccaagaaactcatgaaggcgcgcaccggaaccacgcag 996
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 gaggagcgcgtcaggaacggggccaagaaactcatgaaggcgcgcaccggaaccacgcag 1021
Query: 997 ggcaggctggatggattcttcaaggtgttatcaacaacaccaaacccaaaaaggaaagcg 1056
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 ggcaggctggacggattcttcaaggtgttatcaacaacaccaaacccaaaaaggaaagcg 1081
Query: 1057 gaggaagataaaaagagtgccaacaagaaagttaaaacagctggaagggggcggaaaccg 1116
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1082 gaggaagataaaaagagtgccaacaagaaagttaaaacagctggannnnngcggaaaccg 1141
Query: 1117 aaataagactttaaccgacttgataataaatagtgttatgtttaaggcccattaaaactt 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 aaataagactttaaccgacttgataataaatagtgttatgtttaaggcccattaaaactt 1201
Query: 1177 attaatatgtttgttg 1192
||||||||||||||||
Sbjct: 1202 attaatatgtttgttg 1217
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 156,143
Number of extensions: 3305
Number of successful extensions: 3305
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3305
Number of HSP's successfully gapped: 1
Length of query: 1335
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1318
Effective length of database: 8,119,229
Effective search space: 10701143822
Effective search space used: 10701143822
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)